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Crystal Structure of FtsZ with Z18839017
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-698 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.55 51.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.938 α = 90 b = 87.938 β = 90 c = 177.126 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-698 ftsz-698 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-698 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-698 2.249 43.969 100 0.28 0.292 0.08 0.995 7.5 13.5 36758
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-698 2.249 2.287 100 2.572 2.674 0.73 0.361 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.249 44.008 36750 1926 99.97 0.173 0.1698 0.1779 0.2299 0.2313 45.092
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.275 r_dihedral_angle_3_deg 15.169 r_dihedral_angle_6_deg 13.787 r_lrange_it 12.174 r_lrange_other 12.051 r_scangle_it 10.139 r_scangle_other 10.137 r_scbond_it 6.763 r_scbond_other 6.762 r_dihedral_angle_1_deg 6.708
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.275 r_dihedral_angle_3_deg 15.169 r_dihedral_angle_6_deg 13.787 r_lrange_it 12.174 r_lrange_other 12.051 r_scangle_it 10.139 r_scangle_other 10.137 r_scbond_it 6.763 r_scbond_other 6.762 r_dihedral_angle_1_deg 6.708 r_mcangle_other 6.206 r_mcangle_it 6.203 r_mcbond_it 4.284 r_mcbond_other 4.271 r_angle_refined_deg 1.831 r_angle_other_deg 0.596 r_symmetry_xyhbond_nbd_refined 0.402 r_nbd_other 0.353 r_symmetry_nbd_other 0.337 r_xyhbond_nbd_refined 0.259 r_symmetry_nbd_refined 0.251 r_nbd_refined 0.227 r_nbtor_refined 0.173 r_symmetry_nbtor_other 0.108 r_chiral_restr 0.079 r_symmetry_xyhbond_nbd_other 0.023 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction