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Crystal Structure of FtsZ with Z69092635
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-657 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.436 α = 90 b = 88.436 β = 90 c = 178.951 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-657 ftsz-657 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-657 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-657 1.917 44.218 100 0.221 0.229 0.063 0.997 9.5 13.3 60539
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-657 1.917 1.95 100 2.753 2.862 0.778 0.354 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.917 44.257 60529 3061 99.957 0.183 0.1814 0.189 0.2141 0.2193 32.396
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.005 -0.002 -0.005 0.015
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.795 r_dihedral_angle_6_deg 14.648 r_dihedral_angle_2_deg 11.354 r_lrange_it 8.575 r_lrange_other 8.535 r_scangle_it 7.277 r_scangle_other 7.275 r_dihedral_angle_1_deg 6.668 r_scbond_it 4.702 r_scbond_other 4.701
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.795 r_dihedral_angle_6_deg 14.648 r_dihedral_angle_2_deg 11.354 r_lrange_it 8.575 r_lrange_other 8.535 r_scangle_it 7.277 r_scangle_other 7.275 r_dihedral_angle_1_deg 6.668 r_scbond_it 4.702 r_scbond_other 4.701 r_mcangle_it 4.327 r_mcangle_other 4.326 r_mcbond_it 2.936 r_mcbond_other 2.935 r_angle_refined_deg 1.721 r_angle_other_deg 0.606 r_symmetry_nbd_other 0.432 r_symmetry_xyhbond_nbd_other 0.298 r_nbd_refined 0.221 r_symmetry_xyhbond_nbd_refined 0.198 r_nbd_other 0.181 r_xyhbond_nbd_refined 0.178 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.145 r_symmetry_nbtor_other 0.113 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction