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Crystal Structure of FtsZ with Z31478538
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-656 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.94
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.74 α = 90 b = 88.74 β = 90 c = 178.403 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-656 ftsz-656 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-656 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.92 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-656 1.858 44.37 100 0.211 0.219 0.06 0.997 9.4 13.4 66706
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-656 1.858 1.89 100 3.028 3.148 0.855 0.383 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.858 44.409 66687 3387 99.936 0.183 0.1816 0.1895 0.2085 0.2163 29.466
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.007 -0.004 -0.007 0.023
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.925 r_dihedral_angle_3_deg 14.884 r_dihedral_angle_2_deg 9.87 r_lrange_it 7.877 r_lrange_other 7.845 r_dihedral_angle_1_deg 6.687 r_scangle_it 6.649 r_scangle_other 6.648 r_scbond_it 4.302 r_scbond_other 4.302
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.925 r_dihedral_angle_3_deg 14.884 r_dihedral_angle_2_deg 9.87 r_lrange_it 7.877 r_lrange_other 7.845 r_dihedral_angle_1_deg 6.687 r_scangle_it 6.649 r_scangle_other 6.648 r_scbond_it 4.302 r_scbond_other 4.302 r_mcangle_it 3.854 r_mcangle_other 3.854 r_mcbond_it 2.719 r_mcbond_other 2.712 r_angle_refined_deg 1.789 r_angle_other_deg 0.69 r_symmetry_nbd_other 0.592 r_symmetry_xyhbond_nbd_other 0.287 r_symmetry_nbd_refined 0.28 r_nbd_other 0.236 r_nbd_refined 0.218 r_symmetry_xyhbond_nbd_refined 0.197 r_xyhbond_nbd_refined 0.196 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.152 r_chiral_restr 0.085 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4247 Nucleic Acid Atoms Solvent Atoms 322 Heterogen Atoms 44
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction