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Crystal Structure of FtsZ with Z53825177
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-636 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53.12
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.66 α = 90 b = 88.66 β = 90 c = 179.398 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-636 ftsz-636 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-636 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-636 1.79 44.33 100 0.152 0.158 0.043 0.999 11.4 13.4 74912
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-636 1.79 1.82 100 2.991 3.106 0.834 0.339 13.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.79 44.369 74897 3777 99.961 0.181 0.1794 0.1874 0.2073 0.2155 30.713
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.004 -0.002 -0.004 0.012
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.216 r_dihedral_angle_3_deg 14.015 r_dihedral_angle_6_deg 13.596 r_lrange_it 8.085 r_lrange_other 8.037 r_scangle_it 6.84 r_scangle_other 6.839 r_dihedral_angle_1_deg 6.086 r_scbond_it 4.257 r_scbond_other 4.251
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.216 r_dihedral_angle_3_deg 14.015 r_dihedral_angle_6_deg 13.596 r_lrange_it 8.085 r_lrange_other 8.037 r_scangle_it 6.84 r_scangle_other 6.839 r_dihedral_angle_1_deg 6.086 r_scbond_it 4.257 r_scbond_other 4.251 r_mcangle_it 3.868 r_mcangle_other 3.868 r_mcbond_other 2.596 r_mcbond_it 2.577 r_angle_refined_deg 1.566 r_angle_other_deg 0.518 r_nbd_refined 0.213 r_symmetry_nbd_other 0.191 r_nbd_other 0.183 r_symmetry_xyhbond_nbd_refined 0.181 r_xyhbond_nbd_refined 0.175 r_nbtor_refined 0.167 r_symmetry_nbd_refined 0.161 r_symmetry_nbtor_other 0.081 r_chiral_restr 0.075 r_symmetry_xyhbond_nbd_other 0.045 r_bond_refined_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 312 Heterogen Atoms 44
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction