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Crystal Structure of FtsZ with Z300245038
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-634 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.456 α = 90 b = 88.456 β = 90 c = 178.578 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-634 ftsz-634 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-634 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-634 2.385 42.931 100 0.359 0.374 0.103 0.992 6.9 13.1 31438
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-634 2.385 2.426 100 2.019 2.118 0.636 0.343 11
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.385 42.968 31411 1605 99.86 0.194 0.1914 0.1953 0.2476 0.2453 37.411
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.083 0.041 0.083 -0.269
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.006 r_dihedral_angle_6_deg 14.416 r_lrange_it 8.941 r_lrange_other 8.823 r_dihedral_angle_2_deg 7.687 r_dihedral_angle_1_deg 6.959 r_scangle_it 6.638 r_scangle_other 6.637 r_mcangle_other 4.995 r_mcangle_it 4.994
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.006 r_dihedral_angle_6_deg 14.416 r_lrange_it 8.941 r_lrange_other 8.823 r_dihedral_angle_2_deg 7.687 r_dihedral_angle_1_deg 6.959 r_scangle_it 6.638 r_scangle_other 6.637 r_mcangle_other 4.995 r_mcangle_it 4.994 r_scbond_it 4.06 r_scbond_other 4.059 r_mcbond_it 3.065 r_mcbond_other 3.065 r_angle_refined_deg 1.619 r_angle_other_deg 0.631 r_symmetry_nbd_other 0.549 r_symmetry_xyhbond_nbd_refined 0.253 r_symmetry_xyhbond_nbd_other 0.246 r_nbd_refined 0.225 r_xyhbond_nbd_refined 0.22 r_nbd_other 0.22 r_symmetry_nbd_refined 0.179 r_nbtor_refined 0.17 r_xyhbond_nbd_other 0.163 r_symmetry_nbtor_other 0.149 r_chiral_restr 0.074 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction