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Crystal Structure of FtsZ with Z100449516
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-610 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 52.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.759 α = 90 b = 88.759 β = 90 c = 178.419 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-610 ftsz-610 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-610 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-610 1.819 44.38 100 0.167 0.173 0.047 0.999 10.9 13.4 71107
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-610 1.819 1.851 100 2.5 2.597 0.701 0.351 13.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.819 44.419 71105 3605 99.966 0.185 0.1833 0.1903 0.2153 0.2198 29.309
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.011 -0.006 -0.011 0.036
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.884 r_dihedral_angle_6_deg 15.126 r_dihedral_angle_2_deg 9.775 r_lrange_it 7.869 r_lrange_other 7.806 r_dihedral_angle_1_deg 6.73 r_scangle_it 6.466 r_scangle_other 6.465 r_scbond_it 4.183 r_scbond_other 4.182
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.884 r_dihedral_angle_6_deg 15.126 r_dihedral_angle_2_deg 9.775 r_lrange_it 7.869 r_lrange_other 7.806 r_dihedral_angle_1_deg 6.73 r_scangle_it 6.466 r_scangle_other 6.465 r_scbond_it 4.183 r_scbond_other 4.182 r_mcangle_it 3.805 r_mcangle_other 3.805 r_mcbond_it 2.602 r_mcbond_other 2.601 r_angle_refined_deg 1.836 r_angle_other_deg 0.778 r_symmetry_nbd_other 0.693 r_symmetry_xyhbond_nbd_refined 0.256 r_nbd_refined 0.22 r_xyhbond_nbd_refined 0.213 r_symmetry_nbtor_other 0.196 r_symmetry_xyhbond_nbd_other 0.193 r_nbd_other 0.18 r_symmetry_nbd_refined 0.171 r_nbtor_refined 0.169 r_xyhbond_nbd_other 0.127 r_chiral_restr 0.088 r_bond_refined_d 0.01 r_bond_other_d 0.008 r_gen_planes_refined 0.008 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 328 Heterogen Atoms 65
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction