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Crystal Structure of FtsZ with Z444299230
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-585 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.54 51.52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.773 α = 90 b = 87.773 β = 90 c = 177.022 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-585 ftsz-585 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-585 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-585 2.469 43.887 100 0.394 0.41 0.111 0.991 6.7 13.6 27661
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-585 2.469 2.512 100 2.959 3.07 0.82 0.358 14
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.469 43.925 27658 1401 99.949 0.171 0.1676 0.1741 0.2373 0.2359 44.82
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.016 -0.008 -0.016 0.051
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.269 r_dihedral_angle_6_deg 13.046 r_dihedral_angle_2_deg 12.482 r_lrange_it 11.047 r_lrange_other 10.908 r_scangle_it 8.586 r_scangle_other 8.585 r_dihedral_angle_1_deg 6.964 r_mcangle_other 5.713 r_mcangle_it 5.71
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.269 r_dihedral_angle_6_deg 13.046 r_dihedral_angle_2_deg 12.482 r_lrange_it 11.047 r_lrange_other 10.908 r_scangle_it 8.586 r_scangle_other 8.585 r_dihedral_angle_1_deg 6.964 r_mcangle_other 5.713 r_mcangle_it 5.71 r_scbond_it 5.38 r_scbond_other 5.378 r_mcbond_it 3.599 r_mcbond_other 3.595 r_angle_refined_deg 1.541 r_angle_other_deg 0.547 r_symmetry_nbd_other 0.487 r_symmetry_xyhbond_nbd_refined 0.273 r_xyhbond_nbd_refined 0.223 r_nbd_refined 0.218 r_nbd_other 0.201 r_nbtor_refined 0.169 r_symmetry_nbd_refined 0.168 r_xyhbond_nbd_other 0.16 r_symmetry_xyhbond_nbd_other 0.108 r_symmetry_nbtor_other 0.107 r_chiral_restr 0.071 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction