☰ Navigation Tabs
Crystal Structure of FtsZ with Z1328968520
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-564 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.58 52.28
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.163 α = 90 b = 88.163 β = 90 c = 178.24 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-564 ftsz-564 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-564 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-564 2.051 44.082 100 0.327 0.34 0.092 0.995 7.9 13.4 48958
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-564 2.051 2.086 100 3.488 3.628 0.996 0.353 12.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.051 44.12 48937 2471 99.929 0.181 0.1793 0.1868 0.2179 0.2211 32.463
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.016 -0.008 -0.016 0.053
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.858 r_dihedral_angle_6_deg 14.525 r_lrange_it 8.598 r_lrange_other 8.578 r_dihedral_angle_2_deg 7.218 r_scangle_it 7.192 r_scangle_other 7.191 r_dihedral_angle_1_deg 6.438 r_scbond_it 4.607 r_scbond_other 4.606
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.858 r_dihedral_angle_6_deg 14.525 r_lrange_it 8.598 r_lrange_other 8.578 r_dihedral_angle_2_deg 7.218 r_scangle_it 7.192 r_scangle_other 7.191 r_dihedral_angle_1_deg 6.438 r_scbond_it 4.607 r_scbond_other 4.606 r_mcangle_it 4.093 r_mcangle_other 4.093 r_mcbond_it 2.717 r_mcbond_other 2.717 r_angle_refined_deg 1.661 r_angle_other_deg 0.593 r_symmetry_nbd_other 0.47 r_symmetry_xyhbond_nbd_other 0.229 r_nbd_refined 0.214 r_nbd_other 0.198 r_symmetry_xyhbond_nbd_refined 0.191 r_xyhbond_nbd_refined 0.184 r_nbtor_refined 0.169 r_symmetry_nbd_refined 0.165 r_symmetry_nbtor_other 0.132 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 314 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction