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Crystal Structure of FtsZ with Z822382694
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-546 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.434 α = 90 b = 88.434 β = 90 c = 178.648 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-546 ftsz-546 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-546 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-546 1.909 44.217 100 0.227 0.237 0.067 0.997 8.7 12.4 61251
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-546 1.909 1.942 100 3.37 3.513 0.988 0.321 12.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.909 44.256 61224 3098 99.94 0.179 0.1772 0.1856 0.2136 0.2212 31.951
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.013 -0.007 -0.013 0.042
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.307 r_dihedral_angle_6_deg 14.296 r_dihedral_angle_2_deg 9.544 r_lrange_it 8.757 r_lrange_other 8.658 r_scangle_it 7.528 r_scangle_other 7.527 r_dihedral_angle_1_deg 6.333 r_scbond_it 4.72 r_scbond_other 4.719
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.307 r_dihedral_angle_6_deg 14.296 r_dihedral_angle_2_deg 9.544 r_lrange_it 8.757 r_lrange_other 8.658 r_scangle_it 7.528 r_scangle_other 7.527 r_dihedral_angle_1_deg 6.333 r_scbond_it 4.72 r_scbond_other 4.719 r_mcangle_it 4.317 r_mcangle_other 4.317 r_mcbond_other 2.861 r_mcbond_it 2.838 r_angle_refined_deg 1.782 r_angle_other_deg 0.587 r_symmetry_xyhbond_nbd_refined 0.218 r_nbd_refined 0.214 r_xyhbond_nbd_refined 0.197 r_symmetry_nbd_other 0.194 r_nbd_other 0.187 r_nbtor_refined 0.169 r_symmetry_nbd_refined 0.152 r_symmetry_nbtor_other 0.088 r_chiral_restr 0.082 r_symmetry_xyhbond_nbd_other 0.056 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction