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Crystal Structure of FtsZ with Z57515803
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-540 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.58 52.37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.296 α = 90 b = 88.296 β = 90 c = 178.055 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-540 ftsz-540 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-540 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-540 2.164 44.148 99.9 0.288 0.3 0.081 0.994 8.7 13.5 41747
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-540 2.164 2.201 99.8 2.405 2.497 0.668 0.333 13.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.164 44.187 41741 2160 99.89 0.181 0.1789 0.1862 0.2219 0.2241 36.018
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.026
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.419 r_dihedral_angle_6_deg 13.776 r_lrange_it 8.924 r_lrange_other 8.855 r_scangle_it 7.359 r_scangle_other 7.358 r_dihedral_angle_2_deg 7.184 r_dihedral_angle_1_deg 6.377 r_scbond_it 4.676 r_scbond_other 4.675
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.419 r_dihedral_angle_6_deg 13.776 r_lrange_it 8.924 r_lrange_other 8.855 r_scangle_it 7.359 r_scangle_other 7.358 r_dihedral_angle_2_deg 7.184 r_dihedral_angle_1_deg 6.377 r_scbond_it 4.676 r_scbond_other 4.675 r_mcangle_it 4.354 r_mcangle_other 4.354 r_mcbond_it 2.887 r_mcbond_other 2.88 r_angle_refined_deg 1.537 r_angle_other_deg 0.538 r_symmetry_nbd_other 0.392 r_symmetry_xyhbond_nbd_refined 0.25 r_nbd_refined 0.216 r_xyhbond_nbd_refined 0.187 r_nbd_other 0.181 r_nbtor_refined 0.169 r_symmetry_nbd_refined 0.169 r_symmetry_nbtor_other 0.106 r_symmetry_xyhbond_nbd_other 0.076 r_chiral_restr 0.072 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction