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Crystal Structure of FtsZ with F2189-0570
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-53 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.64 53.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.851 α = 90 b = 88.851 β = 90 c = 179.927 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-53 ftsz-53 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-03-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-53 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920194 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-53 1.995 43.13 100 0.172 0.179 0.049 0.999 12 13.3 54565
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-53 1.995 2.029 100 2.244 2.334 0.641 0.354 13.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.995 43.167 54557 2749 99.954 0.182 0.1804 0.1884 0.2115 0.2188 37.244
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.017 0.009 0.017 -0.056
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.602 r_dihedral_angle_6_deg 14.458 r_lrange_it 9.081 r_lrange_other 9.05 r_scangle_it 7.679 r_scangle_other 7.678 r_dihedral_angle_2_deg 7.547 r_dihedral_angle_1_deg 6.583 r_scbond_it 5.052 r_scbond_other 5.051
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.602 r_dihedral_angle_6_deg 14.458 r_lrange_it 9.081 r_lrange_other 9.05 r_scangle_it 7.679 r_scangle_other 7.678 r_dihedral_angle_2_deg 7.547 r_dihedral_angle_1_deg 6.583 r_scbond_it 5.052 r_scbond_other 5.051 r_mcangle_it 4.71 r_mcangle_other 4.71 r_mcbond_it 3.313 r_mcbond_other 3.311 r_angle_refined_deg 1.709 r_angle_other_deg 0.588 r_symmetry_nbd_other 0.357 r_symmetry_xyhbond_nbd_refined 0.294 r_nbd_refined 0.218 r_symmetry_nbd_refined 0.202 r_nbd_other 0.183 r_xyhbond_nbd_refined 0.178 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.109 r_chiral_restr 0.082 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction