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Crystal Structure of FtsZ with Z71580604
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-527 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.55 51.79
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.884 α = 90 b = 87.884 β = 90 c = 177.561 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-527 ftsz-527 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-527 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-527 2.156 43.942 100 0.23 0.241 0.072 0.997 8.8 11.3 41753
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-527 2.156 2.193 100 2.51 2.627 0.773 0.349 11.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.156 43.981 41739 2165 99.931 0.178 0.175 0.1826 0.2275 0.2313 40.38
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.018 -0.009 -0.018 0.057
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.382 r_dihedral_angle_6_deg 14.114 r_dihedral_angle_2_deg 12.249 r_lrange_it 10.063 r_lrange_other 9.974 r_scangle_it 8.028 r_scangle_other 8.027 r_dihedral_angle_1_deg 6.437 r_scbond_it 5.087 r_scbond_other 5.086
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.382 r_dihedral_angle_6_deg 14.114 r_dihedral_angle_2_deg 12.249 r_lrange_it 10.063 r_lrange_other 9.974 r_scangle_it 8.028 r_scangle_other 8.027 r_dihedral_angle_1_deg 6.437 r_scbond_it 5.087 r_scbond_other 5.086 r_mcangle_it 5.058 r_mcangle_other 5.058 r_mcbond_it 3.27 r_mcbond_other 3.264 r_angle_refined_deg 1.572 r_angle_other_deg 0.576 r_symmetry_nbd_other 0.469 r_symmetry_xyhbond_nbd_refined 0.266 r_xyhbond_nbd_refined 0.229 r_nbd_refined 0.224 r_nbd_other 0.189 r_symmetry_nbd_refined 0.185 r_nbtor_refined 0.17 r_symmetry_nbtor_other 0.122 r_symmetry_xyhbond_nbd_other 0.089 r_chiral_restr 0.067 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction