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Crystal Structure of FtsZ with Z1147504955
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-502 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.57 52.18
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.203 α = 90 b = 88.203 β = 90 c = 177.7 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-502 ftsz-502 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-502 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-502 1.899 44.102 100 0.183 0.19 0.052 0.998 10.4 13.3 61579
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-502 1.899 1.931 100 2.52 2.619 0.71 0.324 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.899 44.14 61574 3105 99.968 0.178 0.1767 0.1848 0.2109 0.2146 33.983
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.027 r_dihedral_angle_6_deg 13.957 r_dihedral_angle_2_deg 9.084 r_lrange_it 8.815 r_lrange_other 8.785 r_scangle_it 7.771 r_scangle_other 7.77 r_dihedral_angle_1_deg 6.299 r_scbond_it 5.104 r_scbond_other 5.102
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.027 r_dihedral_angle_6_deg 13.957 r_dihedral_angle_2_deg 9.084 r_lrange_it 8.815 r_lrange_other 8.785 r_scangle_it 7.771 r_scangle_other 7.77 r_dihedral_angle_1_deg 6.299 r_scbond_it 5.104 r_scbond_other 5.102 r_mcangle_it 4.27 r_mcangle_other 4.27 r_mcbond_it 3.013 r_mcbond_other 3.001 r_angle_refined_deg 1.679 r_angle_other_deg 0.575 r_symmetry_nbd_other 0.417 r_nbd_refined 0.223 r_symmetry_xyhbond_nbd_refined 0.221 r_symmetry_nbd_refined 0.186 r_xyhbond_nbd_refined 0.179 r_nbd_other 0.174 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.119 r_symmetry_xyhbond_nbd_other 0.105 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction