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Crystal Structure of FtsZ with F9995-0998
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-49 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.65 53.57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.013 α = 90 b = 89.013 β = 90 c = 179.717 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-49 ftsz-49 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-03-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-49 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920194 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-49 1.914 43.201 100 0.154 0.161 0.044 0.999 12.4 13.3 61885
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-49 1.914 1.947 100 2.123 2.207 0.6 0.619 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.914 43.239 61751 3116 99.748 0.187 0.1856 0.1933 0.2158 0.2241 33.883
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.007 -0.003 -0.007 0.021
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.787 r_dihedral_angle_6_deg 13.975 r_dihedral_angle_2_deg 8.936 r_lrange_it 8.934 r_lrange_other 8.883 r_scangle_it 7.639 r_scangle_other 7.638 r_dihedral_angle_1_deg 6.326 r_scbond_it 4.963 r_scbond_other 4.962
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.787 r_dihedral_angle_6_deg 13.975 r_dihedral_angle_2_deg 8.936 r_lrange_it 8.934 r_lrange_other 8.883 r_scangle_it 7.639 r_scangle_other 7.638 r_dihedral_angle_1_deg 6.326 r_scbond_it 4.963 r_scbond_other 4.962 r_mcangle_other 4.56 r_mcangle_it 4.559 r_mcbond_it 3.187 r_mcbond_other 3.178 r_angle_refined_deg 1.767 r_angle_other_deg 0.618 r_symmetry_nbd_other 0.456 r_symmetry_xyhbond_nbd_other 0.326 r_symmetry_xyhbond_nbd_refined 0.315 r_nbd_refined 0.217 r_symmetry_nbd_refined 0.204 r_nbd_other 0.188 r_xyhbond_nbd_refined 0.187 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.112 r_chiral_restr 0.083 r_xyhbond_nbd_other 0.046 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction