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Crystal Structure of FtsZ with Z275179758
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-482 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.57 52.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.222 α = 90 b = 88.222 β = 90 c = 177.694 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-482 ftsz-482 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-482 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-482 1.908 44.111 100 0.177 0.184 0.05 0.998 10.5 13.4 60616
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-482 1.908 1.941 100 2.833 2.945 0.803 0.335 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.908 44.15 60601 3063 99.931 0.181 0.1787 0.1864 0.2168 0.2212 35.601
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.012 -0.006 -0.012 0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.104 r_dihedral_angle_6_deg 14.493 r_dihedral_angle_2_deg 10.99 r_lrange_it 8.961 r_lrange_other 8.898 r_scangle_it 7.646 r_scangle_other 7.644 r_dihedral_angle_1_deg 6.378 r_scbond_it 4.998 r_scbond_other 4.997
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.104 r_dihedral_angle_6_deg 14.493 r_dihedral_angle_2_deg 10.99 r_lrange_it 8.961 r_lrange_other 8.898 r_scangle_it 7.646 r_scangle_other 7.644 r_dihedral_angle_1_deg 6.378 r_scbond_it 4.998 r_scbond_other 4.997 r_mcangle_it 4.334 r_mcangle_other 4.334 r_mcbond_it 3.003 r_mcbond_other 3.002 r_angle_refined_deg 1.746 r_angle_other_deg 0.687 r_symmetry_nbd_other 0.578 r_nbd_refined 0.219 r_xyhbond_nbd_refined 0.216 r_symmetry_xyhbond_nbd_refined 0.203 r_nbd_other 0.199 r_symmetry_xyhbond_nbd_other 0.19 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.163 r_symmetry_nbtor_other 0.145 r_chiral_restr 0.082 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction