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Crystal Structure of FtsZ with Z192955056
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-470 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.17
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.688 α = 90 b = 88.688 β = 90 c = 179.502 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-470 ftsz-470 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-470 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-470 1.921 44.344 100 0.186 0.193 0.053 0.998 10.9 13.3 60641
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-470 1.921 1.954 100 2.525 2.625 0.716 0.389 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.921 44.383 60635 3062 99.947 0.183 0.1808 0.1891 0.2151 0.221 33.186
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.001
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.834 r_dihedral_angle_6_deg 14.121 r_dihedral_angle_2_deg 11.281 r_lrange_it 8.652 r_lrange_other 8.609 r_scangle_it 7.255 r_scangle_other 7.254 r_dihedral_angle_1_deg 6.66 r_scbond_it 4.769 r_scbond_other 4.769
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.834 r_dihedral_angle_6_deg 14.121 r_dihedral_angle_2_deg 11.281 r_lrange_it 8.652 r_lrange_other 8.609 r_scangle_it 7.255 r_scangle_other 7.254 r_dihedral_angle_1_deg 6.66 r_scbond_it 4.769 r_scbond_other 4.769 r_mcangle_it 4.226 r_mcangle_other 4.226 r_mcbond_it 2.935 r_mcbond_other 2.928 r_angle_refined_deg 1.732 r_angle_other_deg 0.628 r_symmetry_nbd_other 0.503 r_symmetry_xyhbond_nbd_refined 0.286 r_symmetry_xyhbond_nbd_other 0.28 r_nbd_refined 0.219 r_nbd_other 0.195 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.17 r_xyhbond_nbd_other 0.161 r_symmetry_nbtor_other 0.149 r_symmetry_nbd_refined 0.133 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction