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Crystal Structure of FtsZ with Z2234920345
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-459 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.445 α = 90 b = 88.445 β = 90 c = 178.827 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-459 ftsz-459 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-459 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-459 2.099 42.929 100 0.293 0.305 0.084 0.995 5.8 13.4 46082
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-459 2.099 2.136 100 2.453 2.56 0.731 0.345 12.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.099 42.966 46074 2344 99.946 0.185 0.1833 0.1897 0.2229 0.2263 32.316
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.025
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 19.784 r_dihedral_angle_3_deg 15.195 r_dihedral_angle_6_deg 13.58 r_lrange_it 7.749 r_lrange_other 7.616 r_dihedral_angle_1_deg 6.519 r_scangle_it 6.281 r_scangle_other 6.28 r_scbond_it 4.015 r_scbond_other 4.014
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 19.784 r_dihedral_angle_3_deg 15.195 r_dihedral_angle_6_deg 13.58 r_lrange_it 7.749 r_lrange_other 7.616 r_dihedral_angle_1_deg 6.519 r_scangle_it 6.281 r_scangle_other 6.28 r_scbond_it 4.015 r_scbond_other 4.014 r_mcangle_it 3.701 r_mcangle_other 3.7 r_mcbond_it 2.441 r_mcbond_other 2.441 r_angle_refined_deg 1.743 r_angle_other_deg 0.685 r_symmetry_nbd_other 0.614 r_nbd_refined 0.215 r_xyhbond_nbd_refined 0.215 r_nbd_other 0.205 r_symmetry_nbd_refined 0.196 r_symmetry_xyhbond_nbd_other 0.185 r_symmetry_xyhbond_nbd_refined 0.182 r_nbtor_refined 0.17 r_symmetry_nbtor_other 0.155 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_bond_other_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 317 Heterogen Atoms 59
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction