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Crystal Structure of FtsZ with Z285233820
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-457 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.87
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.642 α = 90 b = 88.642 β = 90 c = 178.514 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-457 ftsz-457 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-457 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-457 1.83 44.321 100 0.162 0.168 0.046 0.999 12.1 13.4 69761
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-457 1.83 1.861 100 2.288 2.378 0.643 0.349 13.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.829 44.36 69758 3551 99.983 0.181 0.1799 0.1883 0.2086 0.216 29.138
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.375 r_dihedral_angle_6_deg 14.052 r_dihedral_angle_2_deg 9.664 r_lrange_it 8.261 r_lrange_other 8.189 r_scangle_it 7.029 r_scangle_other 7.028 r_dihedral_angle_1_deg 6.435 r_dihedral_angle_other_2_deg 4.73 r_scbond_it 4.526
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.375 r_dihedral_angle_6_deg 14.052 r_dihedral_angle_2_deg 9.664 r_lrange_it 8.261 r_lrange_other 8.189 r_scangle_it 7.029 r_scangle_other 7.028 r_dihedral_angle_1_deg 6.435 r_dihedral_angle_other_2_deg 4.73 r_scbond_it 4.526 r_scbond_other 4.525 r_mcangle_other 3.989 r_mcangle_it 3.988 r_mcbond_it 2.784 r_mcbond_other 2.773 r_angle_refined_deg 1.784 r_angle_other_deg 0.638 r_symmetry_nbd_other 0.525 r_nbd_refined 0.216 r_symmetry_xyhbond_nbd_refined 0.215 r_xyhbond_nbd_refined 0.184 r_nbtor_refined 0.167 r_nbd_other 0.166 r_symmetry_nbd_refined 0.162 r_symmetry_xyhbond_nbd_other 0.138 r_symmetry_nbtor_other 0.106 r_chiral_restr 0.085 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction