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Crystal Structure of FtsZ with Z52425517
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-425 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.511 α = 90 b = 88.511 β = 90 c = 178.412 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-425 ftsz-425 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-425 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-425 1.897 44.256 100 0.192 0.199 0.054 0.998 10.7 13.4 62378
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-425 1.897 1.93 100 2.665 2.769 0.746 0.371 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.897 44.295 62369 3151 99.936 0.184 0.1818 0.1893 0.2156 0.2191 32.009
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 0.002
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.82 r_dihedral_angle_6_deg 14.438 r_dihedral_angle_2_deg 9.879 r_lrange_it 8.424 r_lrange_other 8.358 r_scangle_it 6.924 r_scangle_other 6.923 r_dihedral_angle_1_deg 6.759 r_scbond_it 4.462 r_scbond_other 4.461
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.82 r_dihedral_angle_6_deg 14.438 r_dihedral_angle_2_deg 9.879 r_lrange_it 8.424 r_lrange_other 8.358 r_scangle_it 6.924 r_scangle_other 6.923 r_dihedral_angle_1_deg 6.759 r_scbond_it 4.462 r_scbond_other 4.461 r_mcangle_other 4.022 r_mcangle_it 4.021 r_mcbond_it 2.796 r_mcbond_other 2.791 r_angle_refined_deg 1.707 r_angle_other_deg 0.68 r_symmetry_nbd_other 0.62 r_symmetry_xyhbond_nbd_refined 0.317 r_nbd_refined 0.225 r_symmetry_nbd_refined 0.211 r_nbd_other 0.211 r_xyhbond_nbd_refined 0.205 r_nbtor_refined 0.169 r_symmetry_xyhbond_nbd_other 0.145 r_symmetry_nbtor_other 0.134 r_chiral_restr 0.079 r_bond_refined_d 0.009 r_bond_other_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 39
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction