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Crystal Structure of FtsZ with Z30857828
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-423 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.64 53.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.716 α = 90 b = 88.716 β = 90 c = 180.515 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-423 ftsz-423 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-423 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-423 1.923 44.358 100 0.194 0.202 0.055 0.998 10.2 13.4 60866
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-423 1.923 1.956 100 2.795 2.907 0.795 0.32 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.923 44.397 60846 3079 99.934 0.182 0.1808 0.1881 0.2112 0.2178 33.652
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.004 0.002 0.004 -0.013
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.41 r_dihedral_angle_6_deg 13.801 r_lrange_it 9.141 r_lrange_other 9.055 r_scangle_it 7.254 r_scangle_other 7.253 r_dihedral_angle_2_deg 7.119 r_dihedral_angle_1_deg 7.061 r_scbond_it 4.733 r_scbond_other 4.732
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.41 r_dihedral_angle_6_deg 13.801 r_lrange_it 9.141 r_lrange_other 9.055 r_scangle_it 7.254 r_scangle_other 7.253 r_dihedral_angle_2_deg 7.119 r_dihedral_angle_1_deg 7.061 r_scbond_it 4.733 r_scbond_other 4.732 r_mcangle_it 4.354 r_mcangle_other 4.353 r_mcbond_it 2.909 r_mcbond_other 2.902 r_angle_refined_deg 1.772 r_angle_other_deg 0.675 r_symmetry_nbd_other 0.588 r_symmetry_xyhbond_nbd_refined 0.372 r_symmetry_nbd_refined 0.302 r_xyhbond_nbd_other 0.237 r_nbd_other 0.231 r_nbd_refined 0.227 r_xyhbond_nbd_refined 0.202 r_nbtor_refined 0.171 r_symmetry_nbtor_other 0.123 r_symmetry_xyhbond_nbd_other 0.122 r_chiral_restr 0.082 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 316 Heterogen Atoms 37
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction