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Crystal Structure of FtsZ with F6617-2523
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-41 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.73 α = 90 b = 88.73 β = 90 c = 179.617 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-41 ftsz-41 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-03-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-41 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920194 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-41 1.926 44.365 100 0.18 0.188 0.051 0.998 11.4 13.4 60302
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-41 1.926 1.959 100 2.274 2.364 0.644 0.37 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.926 44.404 60296 3050 99.96 0.183 0.1815 0.1891 0.2147 0.221 33.127
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.006 0.003 0.006 -0.018
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.863 r_dihedral_angle_6_deg 14.379 r_dihedral_angle_2_deg 13.643 r_lrange_it 8.925 r_lrange_other 8.828 r_scangle_it 7.535 r_scangle_other 7.533 r_dihedral_angle_1_deg 6.635 r_scbond_it 4.9 r_scbond_other 4.9
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.863 r_dihedral_angle_6_deg 14.379 r_dihedral_angle_2_deg 13.643 r_lrange_it 8.925 r_lrange_other 8.828 r_scangle_it 7.535 r_scangle_other 7.533 r_dihedral_angle_1_deg 6.635 r_scbond_it 4.9 r_scbond_other 4.9 r_mcangle_it 4.345 r_mcangle_other 4.345 r_mcbond_it 2.992 r_mcbond_other 2.983 r_angle_refined_deg 1.74 r_angle_other_deg 0.606 r_symmetry_nbd_other 0.487 r_symmetry_xyhbond_nbd_refined 0.258 r_nbd_refined 0.222 r_nbd_other 0.205 r_xyhbond_nbd_refined 0.19 r_nbtor_refined 0.17 r_symmetry_nbd_refined 0.169 r_symmetry_nbtor_other 0.116 r_chiral_restr 0.079 r_symmetry_xyhbond_nbd_other 0.054 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction