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Crystal Structure of FtsZ with Z1551999220
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-389 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.64 53.48
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.718 α = 90 b = 88.718 β = 90 c = 180.567 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-389 ftsz-389 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-389 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-389 2.357 39.813 99.3 0.378 0.393 0.107 0.994 5.4 13.4 32891
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-389 2.357 2.398 100 2.984 3.114 0.887 0.311 12.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.357 39.845 32863 1700 99.116 0.177 0.175 0.1797 0.2182 0.2188 49.101
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.015 -0.03 0.096
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.251 r_dihedral_angle_6_deg 13.789 r_lrange_other 11.229 r_lrange_it 11.227 r_scangle_it 9.143 r_scangle_other 9.142 r_dihedral_angle_2_deg 7.58 r_dihedral_angle_1_deg 6.595 r_mcangle_other 6.365 r_mcangle_it 6.362
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.251 r_dihedral_angle_6_deg 13.789 r_lrange_other 11.229 r_lrange_it 11.227 r_scangle_it 9.143 r_scangle_other 9.142 r_dihedral_angle_2_deg 7.58 r_dihedral_angle_1_deg 6.595 r_mcangle_other 6.365 r_mcangle_it 6.362 r_scbond_it 5.978 r_scbond_other 5.977 r_mcbond_it 4.265 r_mcbond_other 4.265 r_angle_refined_deg 1.585 r_angle_other_deg 0.55 r_symmetry_nbd_other 0.398 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.202 r_nbtor_refined 0.173 r_symmetry_xyhbond_nbd_refined 0.173 r_nbd_other 0.165 r_symmetry_nbd_refined 0.162 r_symmetry_nbtor_other 0.11 r_symmetry_xyhbond_nbd_other 0.107 r_chiral_restr 0.072 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction