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Crystal Structure of FtsZ with Z45527714
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-351 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.53 51.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.742 α = 90 b = 87.742 β = 90 c = 176.642 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-351 ftsz-351 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-351 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-351 2.436 43.871 100 0.378 0.393 0.106 0.992 7.4 13.6 28724
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-351 2.436 2.478 100 2.704 2.81 0.762 0.352 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.436 43.91 28714 1452 99.934 0.174 0.1706 0.1758 0.2304 0.2293 40.988
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.195 r_dihedral_angle_6_deg 13.796 r_lrange_it 10.125 r_lrange_other 10.082 r_scangle_it 8.199 r_scangle_other 8.198 r_dihedral_angle_1_deg 6.797 r_dihedral_angle_2_deg 6.739 r_mcangle_it 5.383 r_mcangle_other 5.383
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.195 r_dihedral_angle_6_deg 13.796 r_lrange_it 10.125 r_lrange_other 10.082 r_scangle_it 8.199 r_scangle_other 8.198 r_dihedral_angle_1_deg 6.797 r_dihedral_angle_2_deg 6.739 r_mcangle_it 5.383 r_mcangle_other 5.383 r_scbond_it 5.167 r_scbond_other 5.159 r_mcbond_it 3.398 r_mcbond_other 3.392 r_angle_refined_deg 1.613 r_angle_other_deg 0.575 r_symmetry_nbd_other 0.442 r_symmetry_xyhbond_nbd_refined 0.326 r_nbd_refined 0.216 r_symmetry_nbd_refined 0.211 r_xyhbond_nbd_refined 0.193 r_nbd_other 0.186 r_nbtor_refined 0.17 r_chiral_restr_other 0.135 r_symmetry_nbtor_other 0.132 r_chiral_restr 0.073 r_symmetry_xyhbond_nbd_other 0.046 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction