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Crystal Structure of FtsZ with Z45497619
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-342 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.53 51.43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.758 α = 90 b = 87.758 β = 90 c = 176.725 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-342 ftsz-342 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-342 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-342 2.262 43.879 100 0.281 0.292 0.079 0.996 8 13.5 35898
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-342 2.262 2.301 100 3.073 3.196 0.872 0.333 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.262 43.918 35887 1876 99.958 0.17 0.1671 0.1759 0.2241 0.2272 45.427
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.002 0.001 0.002 -0.007
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.803 r_dihedral_angle_6_deg 14.315 r_lrange_it 11.626 r_lrange_other 11.519 r_scangle_it 9.923 r_scangle_other 9.921 r_dihedral_angle_2_deg 8.767 r_dihedral_angle_1_deg 6.654 r_scbond_it 6.453 r_scbond_other 6.453
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.803 r_dihedral_angle_6_deg 14.315 r_lrange_it 11.626 r_lrange_other 11.519 r_scangle_it 9.923 r_scangle_other 9.921 r_dihedral_angle_2_deg 8.767 r_dihedral_angle_1_deg 6.654 r_scbond_it 6.453 r_scbond_other 6.453 r_mcangle_other 6.248 r_mcangle_it 6.246 r_mcbond_it 4.205 r_mcbond_other 4.198 r_angle_refined_deg 1.776 r_angle_other_deg 0.564 r_symmetry_nbd_refined 0.299 r_symmetry_xyhbond_nbd_refined 0.274 r_xyhbond_nbd_refined 0.232 r_nbd_refined 0.221 r_symmetry_nbd_other 0.199 r_nbd_other 0.198 r_chiral_restr_other 0.182 r_nbtor_refined 0.172 r_symmetry_nbtor_other 0.085 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 305 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction