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Crystal Structure of FtsZ with Z29692148
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-330 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.55 51.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.045 α = 90 b = 88.045 β = 90 c = 176.614 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-330 ftsz-330 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-330 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-330 2.008 44.022 100 0.199 0.207 0.057 0.998 10.8 13.3 51561
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-330 2.008 2.042 100 2.427 2.526 0.695 0.345 13.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.008 44.061 51557 2592 99.952 0.182 0.1798 0.1873 0.2224 0.2255 37.122
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.003 0.002 0.003 -0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.539 r_dihedral_angle_6_deg 14.319 r_lrange_it 9.169 r_lrange_other 9.126 r_scangle_it 7.699 r_scangle_other 7.697 r_dihedral_angle_2_deg 7.191 r_dihedral_angle_1_deg 6.415 r_scbond_it 4.981 r_scbond_other 4.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.539 r_dihedral_angle_6_deg 14.319 r_lrange_it 9.169 r_lrange_other 9.126 r_scangle_it 7.699 r_scangle_other 7.697 r_dihedral_angle_2_deg 7.191 r_dihedral_angle_1_deg 6.415 r_scbond_it 4.981 r_scbond_other 4.98 r_mcangle_other 4.71 r_mcangle_it 4.708 r_mcbond_it 3.155 r_mcbond_other 3.15 r_angle_refined_deg 1.666 r_angle_other_deg 0.594 r_symmetry_nbd_other 0.51 r_symmetry_xyhbond_nbd_refined 0.24 r_nbd_refined 0.219 r_xyhbond_nbd_refined 0.212 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.167 r_nbd_other 0.164 r_symmetry_nbtor_other 0.122 r_symmetry_xyhbond_nbd_other 0.112 r_chiral_restr 0.075 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 313 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction