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Crystal Structure of FtsZ with F6608-1013
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-301 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.56 51.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.092 α = 90 b = 88.092 β = 90 c = 177.336 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-301 ftsz-301 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-301 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-301 1.934 44.046 100 0.187 0.194 0.053 0.998 10.7 13.3 57987
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-301 1.934 1.967 100 2.553 2.654 0.724 0.368 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.934 44.085 57984 2912 99.962 0.179 0.1768 0.1844 0.2133 0.2166 35.31
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.002 0.001 0.002 -0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.06 r_dihedral_angle_3_deg 13.79 r_dihedral_angle_2_deg 10.393 r_lrange_it 9.038 r_lrange_other 8.926 r_scangle_it 7.549 r_scangle_other 7.548 r_dihedral_angle_1_deg 6.221 r_scbond_it 4.714 r_scbond_other 4.714
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.06 r_dihedral_angle_3_deg 13.79 r_dihedral_angle_2_deg 10.393 r_lrange_it 9.038 r_lrange_other 8.926 r_scangle_it 7.549 r_scangle_other 7.548 r_dihedral_angle_1_deg 6.221 r_scbond_it 4.714 r_scbond_other 4.714 r_mcangle_other 4.372 r_mcangle_it 4.371 r_mcbond_other 2.879 r_mcbond_it 2.86 r_angle_refined_deg 1.552 r_angle_other_deg 0.51 r_nbd_refined 0.21 r_symmetry_xyhbond_nbd_refined 0.191 r_symmetry_nbd_other 0.188 r_xyhbond_nbd_refined 0.179 r_nbd_other 0.174 r_symmetry_nbd_refined 0.172 r_nbtor_refined 0.166 r_symmetry_nbtor_other 0.082 r_symmetry_xyhbond_nbd_other 0.082 r_chiral_restr 0.072 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction