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Crystal Structure of FtsZ with F3375-2883
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-223 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.67 53.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.006 α = 90 b = 89.006 β = 90 c = 181.285 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-223 ftsz-223 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-223 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-223 2.061 43.22 100 0.255 0.265 0.073 0.997 7.9 13.4 49992
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-223 2.061 2.097 100 2.992 3.118 0.875 0.29 12.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.061 43.257 49555 2505 99.1 0.189 0.1871 0.1946 0.2274 0.2306 37.551
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.005 -0.01 0.032
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.468 r_dihedral_angle_6_deg 14.449 r_lrange_it 9.029 r_lrange_other 8.949 r_dihedral_angle_2_deg 7.948 r_scangle_it 7.203 r_scangle_other 7.202 r_dihedral_angle_1_deg 6.526 r_scbond_it 4.718 r_scbond_other 4.718
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.468 r_dihedral_angle_6_deg 14.449 r_lrange_it 9.029 r_lrange_other 8.949 r_dihedral_angle_2_deg 7.948 r_scangle_it 7.203 r_scangle_other 7.202 r_dihedral_angle_1_deg 6.526 r_scbond_it 4.718 r_scbond_other 4.718 r_mcangle_it 4.543 r_mcangle_other 4.542 r_mcbond_it 3.042 r_mcbond_other 3.041 r_angle_refined_deg 1.583 r_angle_other_deg 0.564 r_symmetry_nbd_other 0.448 r_symmetry_nbd_refined 0.232 r_nbd_refined 0.223 r_symmetry_xyhbond_nbd_refined 0.197 r_nbd_other 0.189 r_xyhbond_nbd_refined 0.18 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.116 r_symmetry_xyhbond_nbd_other 0.077 r_chiral_restr 0.073 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 33
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction