12GB | pdb_000012gb

High Resolution Structure of Monomorphic AB1-40 Fibrils


SOLID-STATE NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1RFDR350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
2PDSD350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
3PAR350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
4ZF-TEDOR350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
5PAIN350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
6INEPT-TOBSY350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
7HETCOR350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
8NCACX350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
9NCOCX350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
10CONCA350 uM [U-13C; U-15N] Amyloid-beta 1-40 fibrils95% H2O/5% D2O20 mM7.41 atm277Bruker AVANCE III 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III800
NMR Refinement
MethodDetailsSoftware
simulated annealingbased on 541 restraintsCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number10
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentPokyManthey, Tonelli, Clos II, Rahimi, Markley and Lee
4refinementTALOS-NCornilescu, Delaglio and Bax