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Rabbit 80S with eEF2,eIF5A and SERBP1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 7TOR
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 22.2227 f_angle_d 0.6098 f_chiral_restr 0.0368 f_plane_restr 0.0044 f_bond_d 0.0023
Sample Rabbit Reticulocyte Lysate
Specimen Preparation Sample Aggregation State CELL Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 157683 Reported Resolution (Å) 2.4 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (7TOR) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type OTHER Electron Dose (electrons/Å**2) 39
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 700 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode OTHER Specimen Holder Model Nominal Magnification Calibrated Magnification Source OTHER Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cisTEM 2DTM CTF CORRECTION CTFFIND 5 MODEL FITTING UCSF ChimeraX CLASSIFICATION FREALIGN RECONSTRUCTION cisTEM MODEL REFINEMENT PHENIX 2.0_5885
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION