☰ Navigation Tabs
Cryo-EM structure of the Rad1-Rad10-Saw1 complex
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 5.1431 f_angle_d 0.5639 f_chiral_restr 0.0437 f_plane_restr 0.0046 f_bond_d 0.0032
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 517980 Reported Resolution (Å) 3.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C1
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 80
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1000 Maximum Defocus (nm) 2500 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 130000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION Topaz 0.2.4 IMAGE ACQUISITION SerialEM CTF CORRECTION cryoSPARC 4.7.0 MODEL FITTING ISOLDE MODEL REFINEMENT PHENIX 1.21_5207 INITIAL EULER ASSIGNMENT cryoSPARC 4.7.0 FINAL EULER ASSIGNMENT cryoSPARC 4.7.0 RECONSTRUCTION cryoSPARC 4.7.0
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 1085035