MA_MAT3VR3016

Predicted interaction between TAF4 (161-360) and TRRAP (901-1350)

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Homo sapiens (Human) TRRAP (Q9Y4A5; 901 - 1350)	transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity	cellular response to stimulus DNA repair-dependent chromatin remodeling response to stimulus cellular component organization cellular response to stress DNA damage response chromatin organization response to stress chromatin remodeling cellular process cellular component organization or biogenesis regulation of biological process regulation of cellular process regulation of apoptotic process cellular response to stimulus DNA repair-dependent chromatin remodeling response to stimulus cellular component organization cellular response to stress DNA damage response chromatin organization response to stress chromatin remodeling cellular process cellular component organization or biogenesis regulation of biological process regulation of cellular process regulation of apoptotic process biological regulation apoptotic process regulation of programmed cell death cell death programmed cell death regulation of double-strand break repair regulation of cellular response to stress regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of response to stress regulation of nucleobase-containing compound metabolic process DNA repair double-strand break repair primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of DNA repair regulation of response to stimulus metabolic process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process regulation of DNA recombination positive regulation of biological process positive regulation of double-strand break repair via homologous recombination positive regulation of response to stimulus positive regulation of metabolic process positive regulation of DNA repair recombinational repair positive regulation of macromolecule metabolic process double-strand break repair via homologous recombination positive regulation of cellular process positive regulation of DNA recombination DNA recombination positive regulation of double-strand break repair regulation of double-strand break repair via homologous recombination positive regulation of DNA metabolic process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process transcription by RNA polymerase II regulation of transcription by RNA polymerase II cell cycle regulation of cell cycle RNA processing RNA splicing regulation of RNA splicing	protein-containing complex intracellular anatomical structure catalytic complex NuA4 histone acetyltransferase complex intracellular membraneless organelle chromatin chromosome transferase complex H4/H2A histone acetyltransferase complex histone acetyltransferase complex acetyltransferase complex H4 histone acetyltransferase complex intracellular organelle cellular anatomical structure protein-containing complex intracellular anatomical structure catalytic complex NuA4 histone acetyltransferase complex intracellular membraneless organelle chromatin chromosome transferase complex H4/H2A histone acetyltransferase complex histone acetyltransferase complex acetyltransferase complex H4 histone acetyltransferase complex intracellular organelle cellular anatomical structure organelle membraneless organelle protein acetyltransferase complex intracellular protein-containing complex protein-DNA complex nucleosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen peptidase complex SAGA-type complex SAGA complex RNA polymerase II transcription regulator complex transcription factor TFTC complex RNA polymerase II, holoenzyme nuclear protein-containing complex transcription regulator complex transferase complex, transferring phosphorus-containing groups nuclear DNA-directed RNA polymerase complex RNA polymerase complex DNA-directed RNA polymerase complex Golgi apparatus cytoplasm endomembrane system ATPase complex nuclear chromosome histone deacetylase complex SWI/SNF superfamily-type complex INO80-type complex Swr1 complex
A	Homo sapiens (Human) TAF4 (O00268; 161 - 360)	protein heterodimerization activity protein binding binding protein dimerization activity DNA binding nucleic acid binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding signaling receptor binding DNA-binding transcription factor binding aryl hydrocarbon receptor binding	transcription preinitiation complex assembly RNA metabolic process cellular component organization cellular component biogenesis protein-DNA complex organization RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process cellular component assembly transcription by RNA polymerase II protein-containing complex assembly cellular component organization or biogenesis transcription initiation at RNA polymerase II promoter transcription preinitiation complex assembly RNA metabolic process cellular component organization cellular component biogenesis protein-DNA complex organization RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process cellular component assembly transcription by RNA polymerase II protein-containing complex assembly cellular component organization or biogenesis transcription initiation at RNA polymerase II promoter protein-containing complex organization protein-DNA complex assembly primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process DNA-templated transcription initiation nucleic acid metabolic process biosynthetic process RNA polymerase II preinitiation complex assembly cellular process metabolic process macromolecule metabolic process regulation of cellular process positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process positive regulation of metabolic process regulation of DNA-templated transcription initiation regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of transcription by RNA polymerase II regulation of biological process positive regulation of transcription initiation by RNA polymerase II biological regulation regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II positive regulation of DNA-templated transcription initiation positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of transcription initiation by RNA polymerase II regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process developmental process multicellular organismal process gonad development reproductive system development reproductive process female gonad development sex differentiation animal organ development female sex differentiation development of primary female sexual characteristics developmental process involved in reproduction multicellular organism development development of primary sexual characteristics anatomical structure development reproductive structure development ovarian follicle development system development mRNA transcription by RNA polymerase II mRNA transcription mRNA metabolic process cellular response to stimulus response to stimulus regulation of cellular response to stress cellular response to stress response to stress regulation of response to stress DNA repair DNA metabolic process regulation of DNA repair DNA damage response regulation of response to stimulus regulation of DNA metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol RNA polymerase II transcription regulator complex membrane-bounded organelle RNA polymerase II, holoenzyme protein-containing complex nucleus membrane-enclosed lumen nuclear protein-containing complex transcription regulator complex transferase complex intracellular organelle lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol RNA polymerase II transcription regulator complex membrane-bounded organelle RNA polymerase II, holoenzyme protein-containing complex nucleus membrane-enclosed lumen nuclear protein-containing complex transcription regulator complex transferase complex intracellular organelle lumen intracellular organelle nucleoplasm catalytic complex intracellular membrane-bounded organelle transferase complex, transferring phosphorus-containing groups nuclear DNA-directed RNA polymerase complex organelle lumen organelle RNA polymerase complex transcription factor TFIID complex DNA-directed RNA polymerase complex intracellular protein-containing complex nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome transcription factor TFTC complex histone acetyltransferase complex SAGA-type complex acetyltransferase complex protein acetyltransferase complex male germ cell nucleus germ cell nucleus histone methyltransferase complex MLL1/2 complex MLL1 complex methyltransferase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR016024	Armadillo-type fold	Homologous Superfamily
B	IPR003152	FATC domain	Domain
B	IPR011989	Armadillo-like helical	Homologous Superfamily
B	IPR046805	Tra1, HEAT repeat ring region	Repeat
B	IPR000403	Phosphatidylinositol 3-/4-kinase, catalytic domain	Domain
B	IPR046807	Tra1, HEAT repeat central region	Repeat
B	IPR050517	DNA Damage Response and Repair Kinase	Family
B	IPR003151	PIK-related kinase, FAT	Domain
B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B	IPR014009	PIK-related kinase, FAT domain	Domain
A	IPR003894	TAFH/NHR1	Domain
A	IPR007900	Transcription initiation factor TFIID component TAF4, C-terminal	Domain
A	IPR009072	Histone-fold	Homologous Superfamily
A	IPR045144	Transcription initiation factor TFIID component TAF4	Family
A	IPR037249	TAFH/NHR1 domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: Q9Y4A5	melanoma schizophrenia cutaneous melanoma ovarian mucinous adenocarcinoma adenoma atypical teratoid rhabdoid tumor gastric adenocarcinoma large cell medulloblastoma malignant ependymoma osteosarcoma ovarian serous adenocarcinoma subependymal giant cell astrocytoma adrenal cortex carcinoma colorectal adenocarcinoma Gaucher disease melanoma schizophrenia cutaneous melanoma ovarian mucinous adenocarcinoma adenoma atypical teratoid rhabdoid tumor gastric adenocarcinoma large cell medulloblastoma malignant ependymoma osteosarcoma ovarian serous adenocarcinoma subependymal giant cell astrocytoma adrenal cortex carcinoma colorectal adenocarcinoma Gaucher disease lung adenocarcinoma malignant mesothelioma nonsyndromic genetic deafness ovarian cancer primitive neuroectodermal tumor astrocytic tumor glioblastoma lung large cell carcinoma medulloblastoma oligodendroglioma
A	Pharos: O00268	lung cancer subependymal giant cell astrocytoma malignant glioma malignant mesothelioma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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