MA_MABAKCEPC0722

Predicted interaction between SYF2 and SYF1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	SYF1	-	ribonucleoprotein complex biogenesis RNA metabolic process mRNA processing protein-RNA complex assembly cellular component organization cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis RNA processing ribonucleoprotein complex biogenesis RNA metabolic process mRNA processing protein-RNA complex assembly cellular component organization cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis RNA processing RNA splicing generation of catalytic spliceosome for first transesterification step protein-containing complex organization spliceosomal conformational changes to generate catalytic conformation primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process biosynthetic process RNA splicing, via transesterification reactions mRNA splicing, via spliceosome cellular process metabolic process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile macromolecule metabolic process	membrane-bounded organelle U2-type spliceosomal complex protein-containing complex intracellular anatomical structure catalytic complex nucleus nuclear protein-containing complex U2-type catalytic step 1 spliceosome intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex membrane-bounded organelle U2-type spliceosomal complex protein-containing complex intracellular anatomical structure catalytic complex nucleus nuclear protein-containing complex U2-type catalytic step 1 spliceosome intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure spliceosomal complex organelle ribonucleoprotein complex catalytic step 1 spliceosome Prp19 complex cytoplasm cytosol U2-type post-mRNA release spliceosomal complex post-mRNA release spliceosomal complex prespliceosome U2-type prespliceosome catalytic step 2 spliceosome U2-type catalytic step 2 spliceosome
A	SYF2	-	RNA splicing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA processing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process RNA splicing, via transesterification reactions mRNA splicing, via spliceosome RNA splicing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process mRNA processing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process RNA splicing, via transesterification reactions mRNA splicing, via spliceosome metabolic process cellular process RNA splicing, via transesterification reactions with bulged adenosine as nucleophile macromolecule metabolic process RNA processing	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle U2-type spliceosomal complex protein-containing complex U2-type post-mRNA release spliceosomal complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle post-mRNA release spliceosomal complex spliceosomal complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle U2-type spliceosomal complex protein-containing complex U2-type post-mRNA release spliceosomal complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle post-mRNA release spliceosomal complex spliceosomal complex organelle ribonucleoprotein complex catalytic complex U2-type catalytic step 1 spliceosome catalytic step 1 spliceosome prespliceosome U2-type prespliceosome catalytic step 2 spliceosome U2-type catalytic step 2 spliceosome Prp19 complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
B	IPR055430	Pre-mRNA-splicing factor Syf1/CRNKL1-like, C-terminal HAT-repeats domain	Domain
B	IPR003107	HAT (Half-A-TPR) repeat	Repeat
B	IPR045075	Pre-mRNA-splicing factor Syf1-like	Family
B	IPR056350	Pre-mRNA-splicing factor SYF1, central HAT repeats domain	Domain
B	IPR055433	Pre-mRNA-splicing factor Syf1-like, N-terminal HAT-repeats domain	Domain
A	IPR013260	mRNA splicing factor SYF2	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.