AF_AFQ9CZ28F1

Computed structure model of Vacuolar-sorting protein SNF8

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Vacuolar-sorting protein SNF8	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity lipid binding channel regulator activity molecular function regulator activity transporter regulator activity	organelle assembly multivesicular body assembly vesicle organization cellular component organization cellular component biogenesis organelle organization cellular component assembly multivesicular body organization endosome organization cellular process cellular component organization or biogenesis endomembrane system organization regulation of biological process regulation of cellular process organelle assembly multivesicular body assembly vesicle organization cellular component organization cellular component biogenesis organelle organization cellular component assembly multivesicular body organization endosome organization cellular process cellular component organization or biogenesis endomembrane system organization regulation of biological process regulation of cellular process catabolic process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process macromolecule catabolic process regulation of primary metabolic process metabolic process protein metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process regulation of biosynthetic process positive regulation of biological process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of protein complex stability regulation of biological quality positive regulation of protein metabolic process positive regulation of protein catabolic process positive regulation of catabolic process RNA metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process localization transport multivesicular body sorting pathway establishment of localization vesicle-mediated transport macroautophagy autophagy process utilizing autophagic mechanism establishment of protein localization cellular localization establishment of protein localization to vacuole intercellular transport late endosome to vacuole transport modification-dependent macromolecule catabolic process late endosome to vacuole transport via multivesicular body sorting pathway establishment of localization in cell intracellular protein localization endosome transport via multivesicular body sorting pathway protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway protein localization to vacuole intracellular transport endosomal transport establishment of protein localization to organelle protein transport modification-dependent protein catabolic process protein localization to organelle macromolecule localization ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ubiquitin-dependent protein catabolic process vacuolar transport intracellular protein transport exosomal secretion establishment of organelle localization regulation of localization positive regulation of secretion by cell positive regulation of exosomal secretion positive regulation of exocytosis secretion by cell regulation of secretion by cell positive regulation of secretion organelle localization vesicle localization positive regulation of cellular component biogenesis secretion regulation of transport regulation of exosomal secretion establishment of vesicle localization export from cell regulation of cellular component biogenesis regulation of vesicle-mediated transport extracellular exosome biogenesis regulation of secretion exocytosis positive regulation of transport extracellular vesicle biogenesis regulation of exocytosis regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of DNA-templated transcription vesicle-mediated transport between endosomal compartments early endosome to late endosome transport localization within membrane endocytic recycling vesicle-mediated transport to the plasma membrane	cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle endosome membrane protein-containing complex ESCRT complex endosome intracellular vesicle membrane protein complex intracellular membrane-bounded organelle endomembrane system cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle endosome membrane protein-containing complex ESCRT complex endosome intracellular vesicle membrane protein complex intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane organelle vesicle organelle membrane ESCRT II complex transcription regulator complex cell periphery plasma membrane late endosome membrane late endosome nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen recycling endosome perinuclear region of cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR016689	ESCRT-2 complex, Snf8	Family
A	IPR040608	Snf8/Vps36 family	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.