AF_AFQ96RW7F1

Computed structure model of Hemicentin-1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Hemicentin-1	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding structural molecule activity extracellular matrix structural constituent	cellular process cell division heterophilic cell-cell adhesion cell adhesion cell-cell adhesion cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization extracellular matrix organization basement membrane organization extracellular structure organization cellular process cell division heterophilic cell-cell adhesion cell adhesion cell-cell adhesion cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization extracellular matrix organization basement membrane organization extracellular structure organization external encapsulating structure organization biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to bacterium response to external stimulus response to external biotic stimulus response to biotic stimulus multicellular organismal process sensory perception of light stimulus system process sensory perception nervous system process visual perception homophilic cell-cell adhesion	cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm basement membrane extracellular matrix external encapsulating structure extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm basement membrane extracellular matrix external encapsulating structure extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell division site cleavage furrow membrane plasma membrane plasma membrane region cell-cell junction adherens junction anchoring junction cell junction muscle tendon junction cell-substrate junction

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A	IPR003598	Immunoglobulin subtype 2	Domain
A	IPR018097	EGF-like calcium-binding, conserved site	Conserved Site
A	IPR026823	Complement Clr-like EGF domain	Domain
A	IPR056861	Hemicentin-1-like, von Willebrand factor A domain	Domain
A	IPR006605	G2 nidogen/fibulin G2F	Domain
A	IPR013106	Immunoglobulin V-set domain	Domain
A	IPR003599	Immunoglobulin domain subtype	Domain
A	IPR000742	EGF-like domain	Domain
A	IPR013098	Immunoglobulin I-set	Domain
A	IPR009017	Green fluorescent protein	Homologous Superfamily
A	IPR050958	Cell Adhesion and Cytoskeletal Organization	Family
A	IPR000884	Thrombospondin type-1 (TSP1) repeat	Repeat
A	IPR056475	Hemicentin/VWA7, galactose-binding domain-like	Domain
A	IPR049883	NOTCH1 EGF-like calcium-binding domain	Domain
A	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
A	IPR036383	Thrombospondin type-1 repeat superfamily	Homologous Superfamily
A	IPR009030	Growth factor receptor cysteine-rich domain superfamily	Homologous Superfamily
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR001881	EGF-like calcium-binding domain	Domain
A	IPR007110	Immunoglobulin-like domain	Domain
A	IPR000152	EGF-type aspartate/asparagine hydroxylation site	PTM

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q96RW7	age related macular degeneration 1 age-related macular degeneration cystic fibrosis Emery-Dreifuss muscular dystrophy large cell medulloblastoma malignant ependymoma primitive neuroectodermal tumor diabetes mellitus glioblastoma lung adenocarcinoma medulloblastoma retinal degeneration atypical teratoid rhabdoid tumor Duchenne muscular dystrophy invasive ductal breast carcinoma age related macular degeneration 1 age-related macular degeneration cystic fibrosis Emery-Dreifuss muscular dystrophy large cell medulloblastoma malignant ependymoma primitive neuroectodermal tumor diabetes mellitus glioblastoma lung adenocarcinoma medulloblastoma retinal degeneration atypical teratoid rhabdoid tumor Duchenne muscular dystrophy invasive ductal breast carcinoma macular degeneration ovarian cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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