AF_AFQ13253F1

Computed structure model of Noggin

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Noggin	molecular function inhibitor activity molecular function regulator activity receptor ligand inhibitor activity protein binding binding growth factor binding identical protein binding protein homodimerization activity protein dimerization activity	developmental process multicellular organism development multicellular organismal process skeletal system development connective tissue development anatomical structure development animal organ development tissue development cartilage development system development heart development cardiac chamber morphogenesis heart morphogenesis ventricular septum development developmental process multicellular organism development multicellular organismal process skeletal system development connective tissue development anatomical structure development animal organ development tissue development cartilage development system development heart development cardiac chamber morphogenesis heart morphogenesis ventricular septum development circulatory system development anatomical structure morphogenesis cardiac septum development cardiac septum morphogenesis ventricular septum morphogenesis cardiac chamber development animal organ morphogenesis cardiac ventricle development behavior exploration behavior trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission signaling biological regulation cell-cell signaling presynaptic modulation of chemical synaptic transmission chemical synaptic transmission cell communication synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication cellular process tube development respiratory tube development lung morphogenesis lung development respiratory system development mesoderm development regulation of developmental process positive regulation of biological process regulation of kidney development positive regulation of glomerulus development positive regulation of kidney development renal system development positive regulation of developmental process glomerulus development regulation of glomerulus development positive regulation of multicellular organismal process regulation of multicellular organismal process nephron development kidney development regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process dorsal/ventral pattern formation pattern specification process regionalization cardiac atrium morphogenesis striated muscle tissue development muscle structure development muscle tissue development muscle organ development atrial cardiac muscle tissue morphogenesis cardiac muscle tissue development cardiac atrium development atrial cardiac muscle tissue development muscle tissue morphogenesis tissue morphogenesis cardiac muscle tissue morphogenesis muscle organ morphogenesis embryonic organ morphogenesis embryonic morphogenesis notochord morphogenesis embryo development embryonic organ development notochord development cellular response to stimulus response to stimulus negative regulation of signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of biological process regulation of signal transduction negative regulation of cell communication negative regulation of Wnt signaling pathway negative regulation of cellular process signal transduction Wnt signaling pathway cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of response to stimulus negative regulation of signal transduction negative regulation of canonical Wnt signaling pathway regulation of response to stimulus membranous septum morphogenesis regulation of growth regulation of cardiac muscle tissue growth developmental growth cardiac muscle cell proliferation negative regulation of cardiac muscle tissue growth organ growth negative regulation of organ growth negative regulation of growth regulation of organ growth regulation of heart growth regulation of cardiac muscle cell proliferation muscle cell proliferation cardiac muscle tissue growth striated muscle cell proliferation negative regulation of cell population proliferation heart growth regulation of multicellular organismal development cell population proliferation regulation of developmental growth negative regulation of heart growth negative regulation of developmental process growth negative regulation of developmental growth regulation of cell population proliferation negative regulation of multicellular organismal process negative regulation of cardiac muscle cell proliferation mesenchyme morphogenesis endocardial cushion morphogenesis mesenchyme development endocardial cushion formation endocardial cushion development anatomical structure formation involved in morphogenesis cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway negative regulation of cellular response to growth factor stimulus negative regulation of BMP signaling pathway cellular response to endogenous stimulus BMP signaling pathway enzyme-linked receptor protein signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus response to BMP transforming growth factor beta receptor superfamily signaling pathway response to growth factor negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway head development forebrain development endocrine system development pituitary gland development gland development brain development diencephalon development nervous system development central nervous system development embryo development ending in birth or egg hatching chordate embryonic development in utero embryonic development negative regulation of intracellular signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette SMAD protein signal transduction regulation of SMAD protein signal transduction negative regulation of SMAD protein signal transduction embryonic epithelial tube formation tube formation epithelial tube formation tube morphogenesis primary neural tube formation epithelial tube morphogenesis morphogenesis of embryonic epithelium epithelium development neural tube development morphogenesis of an epithelium neural tube closure neural tube formation tube closure neural plate development neural plate morphogenesis limb development appendage development regulation of neuronal synaptic plasticity regulation of synaptic plasticity regulation of biological quality cellular developmental process cell differentiation mesenchymal cell differentiation epithelial to mesenchymal transition negative regulation of locomotion regulation of cell motility regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion embryonic skeletal system development prostate gland development reproductive process lateral sprouting from an epithelium developmental process involved in reproduction prostate gland epithelium morphogenesis gland morphogenesis reproductive structure development morphogenesis of an epithelial bud animal organ formation morphogenesis of an epithelial fold reproductive system development prostatic bud formation urogenital system development prostate gland morphogenesis morphogenesis of a branching structure morphogenesis of a branching epithelium short-term synaptic potentiation somatic stem cell population maintenance maintenance of cell number stem cell population maintenance RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process blood vessel morphogenesis artery development pharyngeal arch artery morphogenesis vasculature development pharyngeal system development artery morphogenesis blood vessel development positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process formation of primary germ layer mesoderm morphogenesis gastrulation mesoderm formation ear morphogenesis middle ear morphogenesis ear development sensory organ development sensory organ morphogenesis mesonephric epithelium development kidney epithelium development nephron morphogenesis nephron tubule morphogenesis nephron epithelium morphogenesis nephron tubule development ureteric bud morphogenesis nephron tubule formation renal tubule development nephron epithelium development ureteric bud development mesonephric tubule formation mesonephros development kidney morphogenesis mesonephric tubule morphogenesis ureteric bud formation renal tubule morphogenesis mesonephric tubule development astrocyte differentiation cell development regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis regulation of astrocyte differentiation regulation of cell development regulation of nervous system development neurogenesis negative regulation of neurogenesis gliogenesis negative regulation of nervous system development negative regulation of cell differentiation regulation of glial cell differentiation negative regulation of astrocyte differentiation negative regulation of gliogenesis negative regulation of cell development negative regulation of glial cell differentiation glial cell differentiation ossification osteoblast differentiation spinal cord development response to fibroblast growth factor cell surface receptor protein tyrosine kinase signaling pathway fibroblast growth factor receptor signaling pathway cellular response to fibroblast growth factor stimulus regulation of fibroblast growth factor receptor signaling pathway smoothened signaling pathway activin receptor signaling pathway nodal signaling pathway branching morphogenesis of an epithelial tube regulation of branching involved in ureteric bud morphogenesis regulation of morphogenesis of a branching structure regulation of animal organ morphogenesis positive regulation of morphogenesis of an epithelium branching involved in ureteric bud morphogenesis regulation of morphogenesis of an epithelium regulation of anatomical structure morphogenesis positive regulation of branching involved in ureteric bud morphogenesis embryonic skeletal joint development embryonic skeletal joint morphogenesis skeletal system morphogenesis embryonic skeletal system morphogenesis face morphogenesis head morphogenesis face development body morphogenesis cranial skeletal system development regulation of osteoblast differentiation negative regulation of osteoblast differentiation heart trabecula morphogenesis trabecula morphogenesis neural plate pattern specification neural plate regionalization anterior/posterior pattern specification neural plate anterior/posterior regionalization axonogenesis cell projection organization motor neuron axon guidance plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cellular component organization cell projection morphogenesis neuron differentiation neuron projection morphogenesis cellular component organization or biogenesis plasma membrane bounded cell projection organization axon guidance axon development cell morphogenesis involved in neuron differentiation generation of neurons neuron projection guidance neuron development positive regulation of cell population proliferation positive regulation of epithelial cell proliferation regulation of epithelial cell proliferation epithelial cell proliferation response to light stimulus system process learning learning or memory nervous system process visual learning visual behavior cognition associative learning response to radiation response to abiotic stimulus regulation of epithelial to mesenchymal transition cardiac epithelial to mesenchymal transition regulation of cardiac epithelial to mesenchymal transition negative regulation of epithelial to mesenchymal transition negative regulation of cardiac epithelial to mesenchymal transition axial mesoderm development regulation of programmed cell death negative regulation of apoptotic signaling pathway negative regulation of programmed cell death regulation of apoptotic process cell death apoptotic signaling pathway negative regulation of apoptotic process apoptotic process programmed cell death regulation of apoptotic signaling pathway wound healing response to stress response to wounding endoderm development endoderm formation regulation of cartilage development negative regulation of cartilage development negative regulation of gene expression stem cell differentiation ventricular cardiac muscle tissue morphogenesis ventricular cardiac muscle tissue development ventricular compact myocardium morphogenesis cardiac ventricle morphogenesis hindbrain development cell differentiation in hindbrain positive regulation of cell communication long-term synaptic potentiation positive regulation of synaptic transmission positive regulation of signaling embryonic limb morphogenesis embryonic appendage morphogenesis appendage morphogenesis embryonic digit morphogenesis limb morphogenesis outflow tract morphogenesis somite development	presynapse cellular anatomical structure synapse cell junction extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029034	Cystine-knot cytokine	Homologous Superfamily
A	IPR008717	Noggin	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q13253	tarsal-carpal coalition syndrome brachydactyly type B2 multiple synostoses syndrome 1 proximal symphalangism stapes ankylosis with broad thumbs and toes proximal symphalangism 1A calcaneonavicular coalition multiple synostoses syndrome atypical teratoid rhabdoid tumor intellectual disability MALT lymphoma osteosarcoma sarcoidosis large cell medulloblastoma medulloblastoma tarsal-carpal coalition syndrome brachydactyly type B2 multiple synostoses syndrome 1 proximal symphalangism stapes ankylosis with broad thumbs and toes proximal symphalangism 1A calcaneonavicular coalition multiple synostoses syndrome atypical teratoid rhabdoid tumor intellectual disability MALT lymphoma osteosarcoma sarcoidosis large cell medulloblastoma medulloblastoma NOG-Related-Symphalangism Spectrum Disorder malignant glioma oligodendroglioma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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