AF_AFQ02388F1

Computed structure model of Collagen alpha-1(VII) chain

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Collagen alpha-1(VII) chain	structural molecule activity extracellular matrix structural constituent extracellular matrix structural constituent conferring tensile strength enzyme regulator activity molecular function inhibitor activity peptidase regulator activity serine-type endopeptidase inhibitor activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity	cell adhesion cellular process developmental process multicellular organismal process formation of primary germ layer cellular developmental process embryonic morphogenesis tissue development embryo development gastrulation anatomical structure morphogenesis multicellular organism development endoderm development cell differentiation cell adhesion cellular process developmental process multicellular organismal process formation of primary germ layer cellular developmental process embryonic morphogenesis tissue development embryo development gastrulation anatomical structure morphogenesis multicellular organism development endoderm development cell differentiation anatomical structure development anatomical structure formation involved in morphogenesis endoderm formation endodermal cell differentiation epidermis development	membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm extracellular region basement membrane cell periphery extracellular matrix external encapsulating structure membrane bounding membrane of organelle endoplasmic reticulum-Golgi intermediate compartment membrane endoplasmic reticulum-Golgi intermediate compartment organelle membrane protein-containing complex collagen anchoring fibril collagen trimer basement membrane/interstitial matrix interface von-Willerbrand-factor-A-domain-rich collagen trimer collagen type VII trimer complex of collagen trimers supramolecular complex intracellular vesicle COPII-coated ER to Golgi transport vesicle cytoplasmic vesicle coated vesicle vesicle extracellular space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008160	Collagen triple helix repeat	Repeat
A	IPR003961	Fibronectin type III	Domain
A	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
A	IPR020901	Proteinase inhibitor I2, Kunitz, conserved site	Conserved Site
A	IPR036880	Pancreatic trypsin inhibitor Kunitz domain superfamily	Homologous Superfamily
A	IPR002223	Pancreatic trypsin inhibitor Kunitz domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR050938	Collagen and Collagen-like Structural Proteins	Family
A	IPR002035	von Willebrand factor, type A	Domain
A	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q02388	epidermolysis bullosa dystrophica transient bullous dermolysis of the newborn epidermolysis bullosa with congenital localized absence of skin and deformity of nails epidermolysis bullosa nonsyndromic congenital nail disorder 8 dystrophic epidermolysis bullosa pruriginosa breast carcinoma colorectal cancer ulcerative colitis breast cancer pretibial dystrophic epidermolysis bullosa Epidermolysis Bullosa Dystrophica, Autosomal Recessive, Localisata Variant epidermolysis bullosa simplex superficialis generalized dominant dystrophic epidermolysis bullosa inflammatory bowel disease epidermolysis bullosa dystrophica transient bullous dermolysis of the newborn epidermolysis bullosa with congenital localized absence of skin and deformity of nails epidermolysis bullosa nonsyndromic congenital nail disorder 8 dystrophic epidermolysis bullosa pruriginosa breast carcinoma colorectal cancer ulcerative colitis breast cancer pretibial dystrophic epidermolysis bullosa Epidermolysis Bullosa Dystrophica, Autosomal Recessive, Localisata Variant epidermolysis bullosa simplex superficialis generalized dominant dystrophic epidermolysis bullosa inflammatory bowel disease acral dystrophic epidermolysis bullosa myocardial infarction osteosarcoma psoriasis Crohn disease endogenous depression interstitial cystitis anorexia nervosa non-small cell lung carcinoma centripetalis recessive dystrophic epidermolysis bullosa pancreatic intraductal papillary-mucinous carcinoma colorectal carcinoma cutaneous lupus erythematosus recessive dystrophic epidermolysis bullosa epidermolysis bullosa simplex hydrolethalus syndrome malignant mesothelioma dermatitis Sjogren syndrome

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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