AF_AFP70323F1

Computed structure model of T-box transcription factor TBX1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	T-box transcription factor TBX1	sequence-specific DNA binding DNA binding binding nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding sequence-specific DNA binding DNA binding binding nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding identical protein binding protein binding protein homodimerization activity protein dimerization activity RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding intronic transcription regulatory region sequence-specific DNA binding	developmental process multicellular organism development multicellular organismal process anatomical structure development pattern specification process heart development animal organ development circulatory system development system development embryonic organ morphogenesis embryonic viscerocranium morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis developmental process multicellular organism development multicellular organismal process anatomical structure development pattern specification process heart development animal organ development circulatory system development system development embryonic organ morphogenesis embryonic viscerocranium morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis embryo development anatomical structure morphogenesis embryo development ending in birth or egg hatching skeletal system development cranial skeletal system development animal organ morphogenesis embryonic skeletal system development skeletal system morphogenesis embryonic organ development embryonic skeletal system morphogenesis tissue development mesoderm development cell population proliferation mesenchymal cell proliferation cellular process muscle structure development muscle organ development hard palate development secondary palate development roof of mouth development cellular response to stimulus response to lipid response to stimulus response to oxygen-containing compound cellular response to oxygen-containing compound response to retinoic acid cellular response to chemical stimulus cellular response to retinoic acid response to chemical cellular response to lipid regulation of biological process regulation of cellular process intracellular receptor signaling pathway signaling response to endogenous stimulus biological regulation retinoic acid receptor signaling pathway hormone-mediated signaling pathway intracellular signal transduction cell communication cellular response to endogenous stimulus response to hormone signal transduction nuclear receptor-mediated signaling pathway cellular response to hormone stimulus blood vessel morphogenesis tube development artery development vasculature development tube morphogenesis artery morphogenesis blood vessel development response to fibroblast growth factor cellular response to growth factor stimulus response to growth factor cellular response to fibroblast growth factor stimulus skeletal muscle cell differentiation regulation of tongue muscle cell differentiation cellular developmental process regulation of developmental process skeletal muscle tissue development positive regulation of biological process regulation of cell differentiation regulation of striated muscle cell differentiation muscle cell differentiation myotube differentiation striated muscle tissue development positive regulation of developmental process skeletal muscle organ development regulation of skeletal muscle cell differentiation positive regulation of myotube differentiation positive regulation of cell differentiation cell differentiation regulation of myotube differentiation positive regulation of striated muscle cell differentiation positive regulation of tongue muscle cell differentiation positive regulation of skeletal muscle cell differentiation muscle tissue development regulation of skeletal muscle fiber differentiation positive regulation of cellular process positive regulation of skeletal muscle fiber differentiation positive regulation of muscle cell differentiation tongue muscle cell differentiation regulation of muscle cell differentiation skeletal muscle fiber differentiation striated muscle cell differentiation sensory organ morphogenesis tongue development sensory organ development tongue morphogenesis pharyngeal system development heart morphogenesis ear morphogenesis ear development outer ear morphogenesis cardiac chamber morphogenesis cardiac septum development cardiac septum morphogenesis cardiac chamber development outflow tract septum morphogenesis outflow tract morphogenesis branching morphogenesis of an epithelial tube angiogenesis epithelial tube morphogenesis epithelium development morphogenesis of an epithelium branching involved in blood vessel morphogenesis tissue morphogenesis morphogenesis of a branching structure anatomical structure formation involved in morphogenesis morphogenesis of a branching epithelium muscle organ morphogenesis muscle cell fate commitment cell fate commitment system process sensory perception nervous system process sensory perception of sound sensory perception of mechanical stimulus endocrine system development gland development parathyroid gland development negative regulation of mesenchymal cell apoptotic process mesenchymal cell apoptotic process negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of mesenchymal cell apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death somatic stem cell population maintenance maintenance of cell number stem cell population maintenance negative regulation of developmental process negative regulation of cell differentiation RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process middle ear morphogenesis neuron fate commitment nervous system development cell fate specification generation of neurons neurogenesis neuron differentiation neuron fate specification immune system development hematopoietic or lymphoid organ development thymus development immune system process thyroid gland development aorta morphogenesis aorta development enamel mineralization tooth mineralization odontogenesis of dentin-containing tooth odontogenesis amelogenesis biomineral tissue development head development face morphogenesis head morphogenesis face development body morphogenesis inner ear development inner ear morphogenesis positive regulation of mesenchymal cell proliferation positive regulation of cell population proliferation regulation of mesenchymal cell proliferation regulation of cell population proliferation muscle tissue morphogenesis positive regulation of epithelial cell proliferation regulation of epithelial cell proliferation epithelial cell proliferation stem cell development neural crest cell differentiation neural crest cell development cell development mesenchyme development mesenchymal cell migration stem cell differentiation ameboidal-type cell migration cell migration mesenchymal cell differentiation cell motility neural crest cell migration coronary vasculature development coronary artery morphogenesis coronary vasculature morphogenesis determination of bilateral symmetry determination of left/right symmetry left/right pattern formation regionalization specification of symmetry cranial nerve morphogenesis parasympathetic nervous system development vagus nerve development vagus nerve morphogenesis nerve development cranial nerve development central nervous system development preganglionic parasympathetic fiber development autonomic nervous system development positive regulation of cell communication positive regulation of signal transduction regulation of signal transduction positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette regulation of signaling positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade regulation of cell communication positive regulation of signaling blood vessel remodeling tissue remodeling cochlea development cochlea morphogenesis semicircular canal morphogenesis semicircular canal development otic vesicle development otic vesicle morphogenesis behavior biological process involved in intraspecies interaction between organisms social behavior regulation of animal organ morphogenesis regulation of anatomical structure morphogenesis positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of phosphate metabolic process positive regulation of protein modification process phosphate-containing compound metabolic process protein metabolic process positive regulation of protein phosphorylation phosphorus metabolic process protein modification process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process macromolecule modification regulation of phosphorus metabolic process regulation of phosphorylation soft palate development anterior/posterior pattern specification lymph vessel development ameloblast differentiation columnar/cuboidal epithelial cell differentiation epithelial cell differentiation cardioblast proliferation regulation of cardioblast proliferation animal organ formation regulation of secondary heart field cardioblast proliferation heart formation positive regulation of secondary heart field cardioblast proliferation cell proliferation involved in heart morphogenesis regulation of cell proliferation involved in heart morphogenesis	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001699	T-box transcription factor	Family
A	IPR036960	T-box superfamily	Homologous Superfamily
A	IPR046360	T-box transcription factor, DNA-binding domain	Domain
A	IPR018186	Transcription factor, T-box, conserved site	Conserved Site
A	IPR008967	p53-like transcription factor, DNA-binding domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.