AF_AFP46063F1

Computed structure model of ATP-dependent DNA helicase Q1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	ATP-dependent DNA helicase Q1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid conformation isomerase activity isomerase activity single-stranded DNA binding catalytic activity, acting on a nucleic acid nucleic acid binding DNA/DNA annealing activity catalytic activity, acting on DNA annealing activity catalytic activity macromolecular conformation isomerase activity four-way junction helicase activity DNA helicase activity helicase activity ATP-dependent activity ATP-dependent activity, acting on DNA pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides 3'-5' DNA helicase activity cation binding metal ion binding double-stranded DNA helicase activity	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity replication fork processing cellular response to stimulus double-strand break repair response to stimulus nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity replication fork processing cellular response to stimulus double-strand break repair response to stimulus DNA recombination cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair	cellular anatomical structure membrane intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen cellular anatomical structure membrane intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001650	Helicase, C-terminal domain-like	Domain
A	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A	IPR032284	ATP-dependent DNA helicase RecQ, zinc-binding domain	Domain
A	IPR011545	DEAD/DEAH-box helicase domain	Domain
A	IPR004589	DNA helicase, ATP-dependent, RecQ type	Family
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P46063	breast carcinoma ovarian cancer plasma cell myeloma rheumatoid arthritis ulcerative colitis atypical teratoid rhabdoid tumor glioblastoma juvenile dermatomyositis malignant ependymoma Malignant neoplasm of ovary medulloblastoma pancreatic ductal adenocarcinoma primitive neuroectodermal tumor Rothmund-Thomson syndrome Werner syndrome breast carcinoma ovarian cancer plasma cell myeloma rheumatoid arthritis ulcerative colitis atypical teratoid rhabdoid tumor glioblastoma juvenile dermatomyositis malignant ependymoma Malignant neoplasm of ovary medulloblastoma pancreatic ductal adenocarcinoma primitive neuroectodermal tumor Rothmund-Thomson syndrome Werner syndrome Bloom syndrome Crohn disease hereditary breast carcinoma large cell medulloblastoma malignant glioma nasopharyngeal carcinoma pilocytic astrocytoma psoriasis Sjogren syndrome breast cancer diabetes mellitus IgA glomerulonephritis lymphoplasmacytic lymphoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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