AF_AFP23512F1

Computed structure model of Hepatocyte nuclear factor 3-alpha

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Hepatocyte nuclear factor 3-alpha	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity protein binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity protein binding protein domain specific binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding	developmental process multicellular organismal process epithelium development tube development animal organ development respiratory tube development lung epithelium development tissue development multicellular organism development lung saccule development anatomical structure development lung development respiratory system development alveolar secondary septum development developmental process multicellular organismal process epithelium development tube development animal organ development respiratory tube development lung epithelium development tissue development multicellular organism development lung saccule development anatomical structure development lung development respiratory system development alveolar secondary septum development lung alveolus development system development anatomical structure morphogenesis lung morphogenesis animal organ morphogenesis reproductive system development prostate gland development reproductive process gland development urogenital system development developmental process involved in reproduction reproductive structure development tube morphogenesis regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process positive regulation of programmed cell death regulation of apoptotic process positive regulation of biological process regulation of programmed cell death cell death positive regulation of apoptotic process apoptotic process programmed cell death positive regulation of cellular process regulation of hydrogen peroxide-mediated programmed cell death cellular response to stimulus positive regulation of hydrogen peroxide-mediated programmed cell death response to stimulus programmed cell death in response to reactive oxygen species cellular response to oxidative stress cellular response to chemical stress cellular response to reactive oxygen species hydrogen peroxide-mediated programmed cell death cellular response to stress response to stress response to oxygen-containing compound cellular response to oxygen-containing compound response to reactive oxygen species response to oxidative stress cellular response to chemical stimulus response to chemical anatomical structure formation involved in morphogenesis regulation of epithelial to mesenchymal transition regulation of developmental process cellular developmental process negative regulation of biological process regulation of cell differentiation mesenchyme development cell differentiation negative regulation of cellular process negative regulation of cell differentiation regulation of multicellular organismal process negative regulation of developmental process negative regulation of epithelial to mesenchymal transition epithelial to mesenchymal transition mesenchymal cell differentiation negative regulation of multicellular organismal process epithelial cell differentiation lung epithelial cell differentiation lung cell differentiation neural tube development chordate embryonic development pattern specification process nervous system development embryo development regionalization dorsal/ventral pattern formation embryo development ending in birth or egg hatching dorsal/ventral neural tube patterning neural tube patterning morphogenesis of an epithelium prostate gland epithelium morphogenesis prostate gland morphogenesis tissue morphogenesis gland morphogenesis RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process mesenchymal-epithelial cell signaling signaling mesenchymal-epithelial cell signaling involved in prostate gland development cell-cell signaling cell communication cell surface receptor signaling pathway Notch signaling pathway signal transduction positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process chemical homeostasis homeostatic process glucose homeostasis carbohydrate homeostasis neuron fate commitment cell fate specification generation of neurons neurogenesis neuron differentiation neuron fate specification cell fate commitment connective tissue development prostate gland stromal morphogenesis stem cell differentiation respiratory basal cell differentiation positive regulation of neuron differentiation positive regulation of developmental process positive regulation of cell differentiation regulation of dopaminergic neuron differentiation dopaminergic neuron differentiation positive regulation of dopaminergic neuron differentiation regulation of neuron differentiation regulation of hormone levels regulation of biological quality hormone metabolic process branching morphogenesis of an epithelial tube epithelial tube morphogenesis morphogenesis of a branching structure epithelial tube branching involved in lung morphogenesis morphogenesis of a branching epithelium positive regulation of cell communication positive regulation of signal transduction regulation of signal transduction positive regulation of response to stimulus positive regulation of smoothened signaling pathway regulation of smoothened signaling pathway regulation of signaling smoothened signaling pathway regulation of response to stimulus regulation of cell communication positive regulation of signaling epithelial cell maturation involved in prostate gland development cell development cell maturation epithelial cell differentiation involved in prostate gland development developmental maturation epithelial cell development anatomical structure maturation epithelial cell maturation cell cycle regulation of cell cycle positive regulation of cell cycle mitotic cell cycle regulation of mitotic cell cycle positive regulation of mitotic cell cycle intracellular receptor signaling pathway response to lipid positive regulation of intracellular estrogen receptor signaling pathway hormone-mediated signaling pathway intracellular signal transduction cellular response to endogenous stimulus response to hormone regulation of intracellular signal transduction response to steroid hormone regulation of intracellular estrogen receptor signaling pathway regulation of intracellular steroid hormone receptor signaling pathway nuclear receptor-mediated steroid hormone signaling pathway cellular response to steroid hormone stimulus steroid hormone receptor signaling pathway cellular response to hormone stimulus response to endogenous stimulus positive regulation of intracellular signal transduction estrogen receptor signaling pathway positive regulation of intracellular steroid hormone receptor signaling pathway cellular response to lipid nuclear receptor-mediated signaling pathway secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development prostate glandular acinus development glandular epithelial cell differentiation columnar/cuboidal epithelial cell differentiation response to estradiol cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis	cell projection cellular anatomical structure actin-based cell projection microvillus plasma membrane bounded cell projection membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen cell projection cellular anatomical structure actin-based cell projection microvillus plasma membrane bounded cell projection membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen intracellular membraneless organelle nucleolus fibrillar center membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013638	Fork-head N-terminal	Domain
A	IPR018122	Fork head domain conserved site1	Conserved Site
A	IPR001766	Fork head domain	Domain
A	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A	IPR018533	Forkhead box protein, C-terminal	Domain
A	IPR030456	Fork head domain conserved site 2	Conserved Site
A	IPR050211	Forkhead box domain-containing protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

Prepare Data

Validate Data

Deposit Data

Help and Resources

AF_AFP23512F1

Computed structure model of Hepatocyte nuclear factor 3-alpha

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage