AF_AFP17900F1

Computed structure model of Ganglioside GM2 activator

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ganglioside GM2 activator	hydrolase activity, acting on glycosyl bonds beta-N-acetylgalactosaminidase activity hexosaminidase activity beta-N-acetylhexosaminidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity enzyme regulator activity enzyme activator activity molecular function activator activity phospholipase activator activity molecular function regulator activity lipase activator activity sphingolipid activator protein activity hydrolase activity, acting on glycosyl bonds beta-N-acetylgalactosaminidase activity hexosaminidase activity beta-N-acetylhexosaminidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity enzyme regulator activity enzyme activator activity molecular function activator activity phospholipase activator activity molecular function regulator activity lipase activator activity sphingolipid activator protein activity lipid transporter activity transporter activity	membrane lipid metabolic process sphingolipid catabolic process carbohydrate derivative catabolic process glycosphingolipid catabolic process catabolic process lipid catabolic process glycolipid metabolic process glycosphingolipid metabolic process liposaccharide metabolic process carbohydrate derivative metabolic process primary metabolic process sphingolipid metabolic process membrane lipid catabolic process glycolipid catabolic process membrane lipid metabolic process sphingolipid catabolic process carbohydrate derivative catabolic process glycosphingolipid catabolic process catabolic process lipid catabolic process glycolipid metabolic process glycosphingolipid metabolic process liposaccharide metabolic process carbohydrate derivative metabolic process primary metabolic process sphingolipid metabolic process membrane lipid catabolic process glycolipid catabolic process metabolic process cellular process lipid metabolic process carbohydrate metabolic process oligosaccharide catabolic process oligosaccharide metabolic process carbohydrate catabolic process behavior multicellular organismal process system process learning or memory nervous system process cognition lipid storage nutrient storage localization transport macromolecule localization lipid localization lipid transport establishment of localization ceramide metabolic process ganglioside catabolic process ceramide catabolic process amide metabolic process ganglioside metabolic process neuromuscular process neuromuscular process controlling balance	cell periphery cellular anatomical structure apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen lytic vacuole vacuolar lumen vacuole cell periphery cellular anatomical structure apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane extracellular region membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen lytic vacuole vacuolar lumen vacuole intracellular membrane-bounded organelle lysosomal lumen intracellular organelle lumen intracellular organelle organelle lumen organelle cytoplasm lysosome extracellular exosome extracellular vesicle extracellular organelle extracellular space vesicle extracellular membrane-bounded organelle cytosol basal part of cell basal plasma membrane basolateral plasma membrane intracellular vesicle cytoplasmic vesicle lumen endomembrane system cytoplasmic vesicle vesicle lumen azurophil granule secretory granule lumen azurophil granule lumen secretory granule primary lysosome secretory vesicle cytoplasmic side of plasma membrane cytoplasmic side of membrane side of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR028996	Ganglioside GM2 activator	Family
A	IPR003172	MD-2-related lipid-recognition domain	Domain
A	IPR036846	GM2-AP, lipid-recognition domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P17900	Tay-Sachs disease AB variant Tay-Sachs disease gangliosidosis chronic obstructive pulmonary disease ovarian cancer progressive supranuclear palsy Sjogren syndrome astrocytic tumor tuberculosis cutaneous lupus erythematosus esophageal adenocarcinoma gastric carcinoma inborn errors of metabolism lung cancer medulloblastoma Tay-Sachs disease AB variant Tay-Sachs disease gangliosidosis chronic obstructive pulmonary disease ovarian cancer progressive supranuclear palsy Sjogren syndrome astrocytic tumor tuberculosis cutaneous lupus erythematosus esophageal adenocarcinoma gastric carcinoma inborn errors of metabolism lung cancer medulloblastoma Pick disease psoriasis sphingolipidosis atypical teratoid rhabdoid tumor ulcerative colitis cystic fibrosis glioblastoma intellectual disability lysosomal storage disease osteosarcoma pituitary cancer Sandhoff disease subependymal giant cell astrocytoma transitional cell carcinoma Epileptic encephalopathy gastric cancer large cell medulloblastoma malignant mesothelioma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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