AF_AFP12814F1

Computed structure model of Alpha-actinin-1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Alpha-actinin-1	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding actin filament binding vinculin binding RNA binding double-stranded RNA binding cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding actin filament binding vinculin binding RNA binding double-stranded RNA binding nucleic acid binding transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity transmembrane transporter binding cell adhesion molecule binding integrin binding signaling receptor binding identical protein binding protein homodimerization activity protein dimerization activity structural constituent of postsynapse structural molecule activity structural constituent of synapse	regulation of biological process regulation of cellular process regulation of apoptotic process biological regulation cellular process apoptotic process regulation of programmed cell death cell death programmed cell death cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis regulation of biological process regulation of cellular process regulation of apoptotic process biological regulation cellular process apoptotic process regulation of programmed cell death cell death programmed cell death cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization developmental process cellular developmental process hemopoiesis platelet morphogenesis cell development cell morphogenesis anatomical structure morphogenesis myeloid cell differentiation cell differentiation platelet formation anatomical structure development anatomical structure formation involved in morphogenesis actin filament network formation actin filament organization supramolecular fiber organization focal adhesion assembly cell-substrate junction assembly cell-substrate adhesion cellular component biogenesis cell adhesion cell junction organization cellular component assembly cell-matrix adhesion cell junction assembly cell-substrate junction organization muscle structure development muscle cell development muscle cell differentiation actin filament bundle organization actin filament bundle assembly	cellular anatomical structure cell junction cell projection pseudopodium plasma membrane bounded cell projection anchoring junction focal adhesion cell-substrate junction intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band cellular anatomical structure cell junction cell projection pseudopodium plasma membrane bounded cell projection anchoring junction focal adhesion cell-substrate junction intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cell-cell junction extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytosol cell periphery plasma membrane membrane apical part of cell cluster of actin-based cell projections brush border synapse glutamatergic synapse intercalated disc fascia adherens cell-cell contact zone cell cortex cortical cytoskeleton actin cytoskeleton cytoskeleton cortical actin cytoskeleton ruffle cell leading edge actin filament bundle actomyosin stress fiber contractile actin filament bundle vesicle lumen intracellular vesicle membrane-enclosed lumen cytoplasmic vesicle lumen intracellular membrane-bounded organelle secretory granule lumen endomembrane system intracellular organelle lumen cytoplasmic vesicle organelle lumen secretory granule secretory vesicle platelet alpha granule platelet alpha granule lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001715	Calponin homology domain	Domain
A	IPR014837	EF-hand, Ca insensitive	Domain
A	IPR002048	EF-hand domain	Domain
A	IPR011992	EF-hand domain pair	Homologous Superfamily
A	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
A	IPR001589	Actinin-type actin-binding domain, conserved site	Conserved Site
A	IPR036872	CH domain superfamily	Homologous Superfamily
A	IPR018159	Spectrin/alpha-actinin	Repeat
A	IPR002017	Spectrin repeat	Repeat

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P12814	platelet-type bleeding disorder 15 Liver Cirrhosis, Experimental lung cancer malignant pancreatic neoplasm oligodendroglioma astrocytic tumor Becker muscular dystrophy common variable immunodeficiency Emery-Dreifuss muscular dystrophy glioblastoma juvenile idiopathic arthritis malignant colon neoplasm medulloblastoma ovarian cancer subependymal giant cell astrocytoma platelet-type bleeding disorder 15 Liver Cirrhosis, Experimental lung cancer malignant pancreatic neoplasm oligodendroglioma astrocytic tumor Becker muscular dystrophy common variable immunodeficiency Emery-Dreifuss muscular dystrophy glioblastoma juvenile idiopathic arthritis malignant colon neoplasm medulloblastoma ovarian cancer subependymal giant cell astrocytoma autosomal dominant macrothrombocytopenia celiac disease dermatomyositis exocrine pancreatic carcinoma inflammatory bowel disease large cell medulloblastoma lung adenocarcinoma malignant ependymoma myopathy pancreatic ductal adenocarcinoma ulcerative colitis B-cell chronic lymphocytic leukemia chronic obstructive pulmonary disease Duchenne muscular dystrophy gastric carcinoma juvenile dermatomyositis limb-girdle muscular dystrophy

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.