AF_AFP10914F1

Computed structure model of Interferon regulatory factor 1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Interferon regulatory factor 1	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process transcription by RNA polymerase II apoptotic process cell death programmed cell death response to stimulus regulation of adaptive immune response immune response regulation of response to stimulus immune system process regulation of immune response regulation of immune system process adaptive immune response multicellular organismal process positive regulation of biological process regulation of interleukin-12 production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process regulation of multicellular organismal process interleukin-12 production positive regulation of cellular process positive regulation of interleukin-12 production positive regulation of gene expression positive regulation of multicellular organismal process positive regulation of cytokine production cellular response to stimulus positive regulation of response to biotic stimulus pattern recognition receptor signaling pathway regulation of MyD88-dependent toll-like receptor signaling pathway toll-like receptor signaling pathway regulation of signal transduction response to biotic stimulus cell communication immune response-activating signaling pathway positive regulation of immune response signal transduction positive regulation of immune system process innate immune response-activating signaling pathway response to other organism regulation of innate immune response response to external stimulus defense response to other organism regulation of pattern recognition receptor signaling pathway positive regulation of defense response activation of innate immune response regulation of toll-like receptor signaling pathway activation of immune response regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus signaling positive regulation of response to stimulus positive regulation of response to external stimulus immune response-regulating signaling pathway regulation of response to stress response to stress innate immune response response to external biotic stimulus MyD88-dependent toll-like receptor signaling pathway regulation of signaling positive regulation of innate immune response defense response defense response to symbiont regulation of cell communication cellular response to interferon-beta response to peptide response to interferon-beta response to chemical response to cytokine cellular response to cytokine stimulus regulation of interferon-beta production interferon-beta production positive regulation of type I interferon production type I interferon production positive regulation of interferon-beta production regulation of type I interferon production response to type II interferon cytokine-mediated signaling pathway cellular response to type II interferon interferon-mediated signaling pathway cell surface receptor signaling pathway type II interferon-mediated signaling pathway response to mechanical stimulus response to abiotic stimulus cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus developmental process cellular developmental process CD8-positive, alpha-beta T cell activation CD8-positive, alpha-beta T cell differentiation hemopoiesis cell activation cell development mononuclear cell differentiation lymphocyte activation lymphocyte differentiation leukocyte activation alpha-beta T cell differentiation T cell activation cell differentiation anatomical structure development alpha-beta T cell activation T cell differentiation leukocyte differentiation negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation positive regulation of DNA-templated transcription positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II cell cycle regulation of cell cycle defense response to virus response to virus positive regulation of transcription by RNA polymerase II regulation of leukocyte differentiation regulation of leukocyte activation regulation of cell activation regulation of cell differentiation regulation of cell development negative regulation of cell adhesion multicellular organism development negative regulation of T cell differentiation negative regulation of hemopoiesis negative regulation of leukocyte differentiation negative regulation of T cell activation negative regulation of leukocyte cell-cell adhesion negative regulation of cell-cell adhesion negative regulation of lymphocyte differentiation regulation of leukocyte cell-cell adhesion negative regulation of multicellular organismal process negative regulation of leukocyte activation regulation of developmental process negative regulation of lymphocyte activation leukocyte cell-cell adhesion regulation of T cell differentiation cell adhesion cell-cell adhesion negative regulation of regulatory T cell differentiation negative regulation of cell differentiation regulation of cell-cell adhesion regulation of lymphocyte differentiation regulation of multicellular organismal development negative regulation of developmental process regulation of cell adhesion regulation of regulatory T cell differentiation regulation of T cell activation negative regulation of cell activation negative regulation of cell development negative regulation of immune system process regulatory T cell differentiation regulation of hemopoiesis regulation of lymphocyte activation regulation of alpha-beta T cell activation CD8-positive, alpha-beta T cell proliferation leukocyte proliferation regulation of alpha-beta T cell proliferation alpha-beta T cell proliferation lymphocyte proliferation T cell proliferation regulation of lymphocyte proliferation regulation of leukocyte proliferation regulation of CD8-positive, alpha-beta T cell proliferation regulation of T cell proliferation mononuclear cell proliferation regulation of mononuclear cell proliferation regulation of CD8-positive, alpha-beta T cell activation	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001346	Interferon regulatory factor, DNA-binding domain	Domain
A	IPR017431	Interferon regulatory factor-1/2	Family
A	IPR019817	Interferon regulatory factor, conserved site	Conserved Site
A	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P10914	gastric cancer lung cancer ulcerative colitis hereditary diffuse gastric adenocarcinoma Crohn disease dermatomyositis plasma cell myeloma Sjogren syndrome gastric neoplasm interstitial cystitis acne juvenile idiopathic arthritis asthma bipolar disorder lung carcinoma gastric cancer lung cancer ulcerative colitis hereditary diffuse gastric adenocarcinoma Crohn disease dermatomyositis plasma cell myeloma Sjogren syndrome gastric neoplasm interstitial cystitis acne juvenile idiopathic arthritis asthma bipolar disorder lung carcinoma Brain Injuries, Focal cancer nasal cavity disease congenital anemia osteosarcoma cutaneous lupus erythematosus pancreatic intraductal papillary-mucinous neoplasm diabetes mellitus polycystic ovary syndrome stomach carcinoma in situ glioblastoma inflammatory bowel disease invasive ductal breast carcinoma lung benign neoplasm B-cell chronic lymphocytic leukemia brain aneurysm brain injury coronary artery disease ovarian cancer pilocytic astrocytoma esophageal adenocarcinoma psoriasis gastric carcinoma transitional cell carcinoma head and neck cancer juvenile dermatomyositis allergic rhinitis benign neoplasm of stomach malignant ependymoma myocardial ischemia cerebrovascular disorder non-small cell lung carcinoma pancreatic ductal adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.