AF_AFP09405F1

Computed structure model of Nucleolin

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nucleolin	protein binding binding insulin receptor substrate binding histone binding sequence-specific DNA binding DNA binding nucleic acid binding telomeric repeat DNA binding extracellular matrix binding laminin binding RNA binding rRNA primary transcript binding rRNA binding identical protein binding protein binding binding insulin receptor substrate binding histone binding sequence-specific DNA binding DNA binding nucleic acid binding telomeric repeat DNA binding extracellular matrix binding laminin binding RNA binding rRNA primary transcript binding rRNA binding identical protein binding DNA topoisomerase binding enzyme binding cation binding ion binding calcium ion binding metal ion binding small molecule binding PH domain binding protein domain specific binding signaling receptor binding selenocysteine insertion sequence binding mRNA binding ErbB-4 class receptor binding mRNA 5'-UTR binding single-stranded DNA binding	cellular response to stimulus cellular response to nitrogen compound regulation of cellular process response to stimulus negative regulation of signaling signaling response to peptide hormone negative regulation of biological process regulation of signal transduction insulin receptor signaling pathway regulation of cellular response to insulin stimulus negative regulation of cell communication cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular response to endogenous stimulus cellular response to stimulus cellular response to nitrogen compound regulation of cellular process response to stimulus negative regulation of signaling signaling response to peptide hormone negative regulation of biological process regulation of signal transduction insulin receptor signaling pathway regulation of cellular response to insulin stimulus negative regulation of cell communication cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular response to endogenous stimulus response to hormone negative regulation of cellular process signal transduction enzyme-linked receptor protein signaling pathway cellular response to hormone stimulus regulation of signaling regulation of biological process cell surface receptor signaling pathway negative regulation of response to stimulus response to endogenous stimulus regulation of insulin receptor signaling pathway biological regulation response to oxygen-containing compound cellular response to peptide hormone stimulus response to nitrogen compound negative regulation of signal transduction cellular response to oxygen-containing compound cellular response to chemical stimulus negative regulation of cellular response to insulin stimulus regulation of response to stimulus negative regulation of insulin receptor signaling pathway response to chemical response to insulin regulation of cell communication cellular process cellular response to insulin stimulus positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of transcription by RNA polymerase II primary metabolic process regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process protein biosynthetic process post-transcriptional regulation of gene expression negative regulation of translation protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of protein metabolic process negative regulation of metabolic process translation negative regulation of gene expression negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process developmental process multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development blood vessel development system development negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production regulation of cytokine production cytokine production regulation of multicellular organismal process positive regulation of gene expression positive regulation of multicellular organismal process positive regulation of cytokine production localization import into cell transport endocytosis establishment of localization vesicle-mediated transport ribonucleoprotein complex biogenesis rRNA processing cellular component biogenesis ribosome biogenesis cellular component organization or biogenesis RNA processing rRNA metabolic process regulation of rRNA processing biological process involved in interspecies interaction between organisms response to lipid response to other organism cellular response to lipopolysaccharide response to external stimulus cellular response to molecule of bacterial origin response to lipopolysaccharide response to biotic stimulus cellular response to biotic stimulus response to bacterium cellular response to lipid response to external biotic stimulus response to molecule of bacterial origin cellular response to growth factor stimulus cellular response to epidermal growth factor stimulus response to epidermal growth factor response to growth factor regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production regulation of transcription of nucleolar large rRNA by RNA polymerase I transcription by RNA polymerase I rRNA transcription positive regulation of transcription by RNA polymerase I regulation of transcription by RNA polymerase I nucleolar large rRNA transcription by RNA polymerase I positive regulation of transcription of nucleolar large rRNA by RNA polymerase I regulation of mRNA splicing, via spliceosome mRNA processing positive regulation of mRNA metabolic process positive regulation of mRNA processing positive regulation of mRNA splicing, via spliceosome regulation of mRNA processing RNA splicing regulation of RNA splicing mRNA metabolic process RNA splicing, via transesterification reactions mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process positive regulation of RNA splicing response to peptide response to cytokine response to leukemia inhibitory factor cellular response to cytokine stimulus cellular response to leukemia inhibitory factor	cell periphery cellular anatomical structure plasma membrane membrane cornified envelope intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome membrane-bounded organelle nucleus membrane-enclosed lumen cell periphery cellular anatomical structure plasma membrane membrane cornified envelope intracellular organelle intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle nucleolus intracellular organelle lumen organelle lumen nuclear lumen cell cortex cytoplasm cell surface nucleoplasm protein-containing complex cytoplasmic ribonucleoprotein granule supramolecular complex ribonucleoprotein granule dense fibrillar component nuclear protein-containing complex spliceosomal complex ribonucleoprotein complex fibrillar center

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR034234	Nucleolin, RNA recognition motif 3	Domain
A	IPR000504	RNA recognition motif domain	Domain
A	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
A	IPR034233	Nucleolin, RNA recognition motif 2	Domain
A	IPR034230	Nucleolin, RNA recognition motif 1	Domain
A	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
A	IPR034235	Nucleolin, RNA recognition motif 4	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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AF_AFP09405F1

Computed structure model of Nucleolin

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage