AF_AFO60488F1

Computed structure model of Long-chain-fatty-acid--CoA ligase 4

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Long-chain-fatty-acid--CoA ligase 4	CoA-ligase activity fatty acid ligase activity very long-chain fatty acid-CoA ligase activity ligase activity, forming carbon-sulfur bonds fatty acid-CoA ligase activity catalytic activity acid-thiol ligase activity ligase activity ATP-dependent activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding CoA-ligase activity fatty acid ligase activity very long-chain fatty acid-CoA ligase activity ligase activity, forming carbon-sulfur bonds fatty acid-CoA ligase activity catalytic activity acid-thiol ligase activity ligase activity ATP-dependent activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding long-chain fatty acid-CoA ligase activity arachidonate-CoA ligase activity palmitoyl-CoA ligase activity	regulation of growth regulation of biological process regulation of cellular process regulation of cellular component organization biological regulation growth positive regulation of biological process positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular process cellular component organization or biogenesis regulation of growth regulation of biological process regulation of cellular process regulation of cellular component organization biological regulation growth positive regulation of biological process positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular process cellular component organization or biogenesis positive regulation of cellular process lipid biosynthetic process fatty-acyl-CoA biosynthetic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process acyl-CoA biosynthetic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process amide metabolic process fatty-acyl-CoA metabolic process phosphorus metabolic process nucleoside phosphate metabolic process fatty acid derivative biosynthetic process primary metabolic process amide biosynthetic process long-chain fatty-acyl-CoA metabolic process long-chain fatty-acyl-CoA biosynthetic process nucleobase-containing compound biosynthetic process fatty acid derivative metabolic process purine-containing compound metabolic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process metabolic process lipid metabolic process fatty acid metabolic process unsaturated fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process unsaturated fatty acid biosynthetic process monocarboxylic acid metabolic process long-chain fatty acid metabolic process developmental process multicellular organismal process cellular developmental process nervous system development generation of neurons neurogenesis multicellular organism development neuron differentiation cell differentiation anatomical structure development system development multi-multicellular organism process reproductive process multicellular organismal reproductive process embryo development embryonic process involved in female pregnancy embryo development ending in birth or egg hatching female pregnancy multi-organism reproductive process regulation of localization negative regulation of biological process negative regulation of transport negative regulation of lipid localization cell communication localization negative regulation of icosanoid secretion regulation of prostaglandin secretion negative regulation of secretion monocarboxylic acid transport fatty acid transport negative regulation of secretion by cell prostaglandin secretion carboxylic acid transport negative regulation of fatty acid transport lipid transport establishment of localization regulation of fatty acid transport regulation of secretion organic acid transport lipid export from cell negative regulation of organic acid transport prostaglandin transport transport signaling regulation of lipid transport regulation of secretion by cell secretion by cell negative regulation of prostaglandin secretion icosanoid transport signal release regulation of icosanoid secretion negative regulation of cellular process icosanoid secretion organic anion transport negative regulation of lipid transport regulation of transport secretion export from cell cell-cell signaling lipid localization regulation of lipid localization macromolecule localization regulation of organic acid transport long-chain fatty acid biosynthetic process positive regulation of cell communication establishment of protein localization nitrogen compound transport positive regulation of establishment of protein localization positive regulation of insulin secretion intracellular protein localization regulation of biological quality regulation of peptide hormone secretion regulation of hormone levels positive regulation of peptide hormone secretion establishment of protein localization to extracellular region protein secretion regulation of protein secretion positive regulation of protein localization regulation of hormone secretion regulation of protein localization regulation of peptide secretion positive regulation of secretion by cell hormone secretion protein localization to extracellular region positive regulation of protein transport peptide secretion positive regulation of hormone secretion positive regulation of secretion amide transport positive regulation of peptide secretion regulation of signaling regulation of peptide transport regulation of establishment of protein localization regulation of protein transport positive regulation of protein secretion peptide transport positive regulation of transport protein transport regulation of insulin secretion peptide hormone secretion hormone transport regulation of cell communication insulin secretion positive regulation of signaling olefinic compound metabolic process alpha-linolenic acid metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle organelle membrane contact site mitochondria-associated endoplasmic reticulum membrane contact site membrane extracellular exosome extracellular vesicle extracellular organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle organelle membrane contact site mitochondria-associated endoplasmic reticulum membrane contact site membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cell periphery plasma membrane organelle subcompartment endomembrane system endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane lipid droplet membraneless organelle intracellular membraneless organelle mitochondrial membrane organelle outer membrane organelle envelope bounding membrane of organelle mitochondrial envelope mitochondrial outer membrane outer membrane peroxisome microbody membrane peroxisomal membrane microbody

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR020845	AMP-binding, conserved site	Conserved Site
A	IPR045851	AMP-binding enzyme, C-terminal domain superfamily	Homologous Superfamily
A	IPR042099	ANL, N-terminal domain	Homologous Superfamily
A	IPR000873	AMP-dependent synthetase/ligase domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O60488	intellectual disability, X-linked 63 Alport syndrome-intellectual disability-midface hypoplasia-elliptocytosis syndrome familial hemolytic anemia Arthritis, Experimental prostate cancer endogenous depression hereditary elliptocytosis melancholia intellectual disability Alport syndrome hepatocellular carcinoma malignant colon neoplasm myopathy tuberculosis breast cancer intellectual disability, X-linked 63 Alport syndrome-intellectual disability-midface hypoplasia-elliptocytosis syndrome familial hemolytic anemia Arthritis, Experimental prostate cancer endogenous depression hereditary elliptocytosis melancholia intellectual disability Alport syndrome hepatocellular carcinoma malignant colon neoplasm myopathy tuberculosis breast cancer cystic fibrosis glioblastoma interstitial cystitis lung adenocarcinoma adenoma neurotic disorder astrocytic tumor ulcerative colitis colorectal cancer diabetes mellitus hemolytic anemia invasive ductal breast carcinoma lung cancer ovarian cancer schizophrenia atypical teratoid rhabdoid tumor Crohn disease depressive disorder

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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