AF_AFO54942F1

Computed structure model of Claudin-5

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Claudin-5	structural molecule activity identical protein binding protein binding binding	calcium-independent cell-cell adhesion cell adhesion cell-cell adhesion cellular process regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression calcium-independent cell-cell adhesion cell adhesion cell-cell adhesion cellular process regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process negative regulation of vascular permeability regulation of vascular permeability multicellular organismal process system process circulatory system process vascular process in circulatory system regulation of biological quality blood circulation response to stimulus response to alcohol response to chemical response to oxygen-containing compound response to ethanol cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation developmental process cellular developmental process cell differentiation anatomical structure development cell development establishment of blood-retinal barrier tight junction organization cellular component organization cellular component biogenesis cell junction organization cellular component assembly tight junction assembly cell junction assembly cellular component organization or biogenesis cell-cell junction assembly cell-cell junction organization negative regulation of locomotion regulation of cell motility negative regulation of biological process regulation of locomotion negative regulation of cellular process regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion maintenance of blood-brain barrier multicellular organismal-level homeostasis homeostatic process anatomical structure homeostasis tissue homeostasis regulation of establishment of endothelial barrier regulation of developmental process positive regulation of endothelial cell development endothelium development regulation of cell differentiation epithelial cell differentiation regulation of cell development regulation of epithelial cell differentiation endothelial cell development positive regulation of developmental process multicellular organism development positive regulation of cell differentiation regulation of endothelial cell development regulation of multicellular organismal process epithelium development regulation of multicellular organismal development endothelial cell differentiation regulation of endothelial cell differentiation positive regulation of cell development positive regulation of establishment of endothelial barrier tissue development epithelial cell development establishment of endothelial barrier myelination axon ensheathment ensheathment of neurons nervous system development system development angiogenesis regulation of vasculature development tube morphogenesis regulation of anatomical structure morphogenesis blood vessel development blood vessel morphogenesis tube development negative regulation of blood vessel morphogenesis negative regulation of developmental process negative regulation of angiogenesis vasculature development circulatory system development negative regulation of vasculature development anatomical structure morphogenesis regulation of angiogenesis anatomical structure formation involved in morphogenesis negative regulation of multicellular organismal process negative regulation of metabolic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of macromolecule metabolic process bicellular tight junction assembly positive regulation of cellular component organization regulation of cellular component organization regulation of bicellular tight junction assembly positive regulation of cellular component biogenesis regulation of cellular component biogenesis apical junction assembly regulation of cell junction assembly positive regulation of cell junction assembly positive regulation of bicellular tight junction assembly cellular response to stimulus cellular response to growth factor stimulus cell surface receptor protein serine/threonine kinase signaling pathway cell surface receptor signaling pathway signaling cellular response to transforming growth factor beta stimulus response to endogenous stimulus cell communication cellular response to endogenous stimulus response to transforming growth factor beta transforming growth factor beta receptor signaling pathway response to growth factor transforming growth factor beta receptor superfamily signaling pathway signal transduction enzyme-linked receptor protein signaling pathway	cell-cell junction cellular anatomical structure anchoring junction cell junction axon cell projection paranode region of axon main axon neuron projection plasma membrane bounded cell projection cell periphery plasma membrane membrane apicolateral plasma membrane cell-cell junction cellular anatomical structure anchoring junction cell junction axon cell projection paranode region of axon main axon neuron projection plasma membrane bounded cell projection cell periphery plasma membrane membrane apicolateral plasma membrane plasma membrane region compact myelin myelin sheath Schmidt-Lanterman incisure intracellular anatomical structure cell cortex cortical cytoskeleton intracellular membraneless organelle actin cytoskeleton intracellular organelle cytoskeleton organelle membraneless organelle cortical actin cytoskeleton cytoplasm apical junction complex bicellular tight junction tight junction lateral plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR003551	Claudin-5	Family
A	IPR006187	Claudin	Family
A	IPR004031	PMP-22/EMP/MP20/Claudin	Family
A	IPR017974	Claudin, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.