AF_AFO00294F1

Computed structure model of Tubby-related protein 1

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Tubby-related protein 1	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding small molecule binding	localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization detection of light stimulus involved in visual perception detection of light stimulus response to light stimulus multicellular organismal process detection of external stimulus sensory perception of light stimulus system process nervous system process response to stimulus localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization detection of light stimulus involved in visual perception detection of light stimulus response to light stimulus multicellular organismal process detection of external stimulus sensory perception of light stimulus system process nervous system process response to stimulus response to external stimulus detection of abiotic stimulus detection of stimulus sensory perception detection of light stimulus involved in sensory perception response to abiotic stimulus response to radiation visual perception detection of stimulus involved in sensory perception multicellular organismal-level homeostasis homeostatic process anatomical structure homeostasis tissue homeostasis retina homeostasis protein localization to photoreceptor outer segment protein localization to non-motile cilium developmental process sensory organ development eye development animal organ development retina development in camera-type eye visual system development multicellular organism development camera-type eye development anatomical structure development sensory system development system development regulation of localization import into cell positive regulation of cellular component organization regulation of cellular process regulation of cellular component organization transport positive regulation of biological process vesicle-mediated transport cellular component organization positive regulation of endocytosis phagocytosis cellular component organization or biogenesis positive regulation of cellular process regulation of endocytosis regulation of biological process regulation of transport biological regulation regulation of phagocytosis regulation of vesicle-mediated transport establishment of localization positive regulation of phagocytosis positive regulation of transport cellular process endocytosis cellular developmental process photoreceptor cell differentiation cell development eye morphogenesis neurogenesis neuron differentiation cell differentiation eye photoreceptor cell differentiation animal organ morphogenesis photoreceptor cell development eye photoreceptor cell development nervous system development generation of neurons anatomical structure morphogenesis sensory organ morphogenesis neuron development plasma membrane bounded cell projection organization cell projection organization neuron projection development dendrite development photoreceptor cell maintenance phagocytosis, recognition cell recognition	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection photoreceptor inner segment intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane non-motile cilium membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection photoreceptor inner segment intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane non-motile cilium 9+0 non-motile cilium neuron projection photoreceptor outer segment photoreceptor cell cilium extracellular region synapse cell junction axon axon terminus presynapse distal axon neuron projection terminus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR025659	Tubby-like, C-terminal	Homologous Superfamily
A	IPR000007	Tubby, C-terminal	Domain
A	IPR018066	Tubby, C-terminal, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: O00294	Leber congenital amaurosis retinitis pigmentosa Leber congenital amaurosis 15 retinitis pigmentosa 14 cone-rod dystrophy colorectal adenoma Hashimoto thyroiditis retinal degeneration colorectal cancer inherited retinal dystrophy large cell medulloblastoma medulloblastoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.