Refinement of PDB-3J5R against EMD-8117 using EMAN2
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth B], B [auth A], C, D | PF00023 | Ankyrin repeat (Ank) | Ankyrin repeat | - | Repeat |
| A [auth B], B [auth A], C, D | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth B], B [auth A], C, D | IPR002110 | Ankyrin repeat | Repeat |
| A [auth B], B [auth A], C, D | IPR024862 | Transient receptor potential cation channel subfamily V | Family |
| A [auth B], B [auth A], C, D | IPR008347 | Transient receptor potential cation channel subfamily V member 1-4 | Family |
| A [auth B], B [auth A], C, D | IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily |
| A [auth B], B [auth A], C, D | IPR005821 | Ion transport domain | Domain |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Transient Receptor Potential (TRP) | TRPV1 transient receptor potential channel capsaicin receptor |














