9LXR | pdb_00009lxr

A Cryo-EM structure of LA-PTH-PTH1R-Beta-arrestin1 complex (state 1 conformation)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091124 3000473 SCOP2B (2022-06-29)
E [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091124 3000473 SCOP2B (2022-06-29)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth C]Heavy ChainIGHV3 -beta-arrestin-1 | parathyroid hormone/parathyroid hormone-related peptidereceptor SAbDab (2025-12-19)
C [auth E]Light ChainIGKV1 Kappabeta-arrestin-1 | parathyroid hormone/parathyroid hormone-related peptidereceptor SAbDab (2025-12-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF00339Arrestin (or S-antigen), N-terminal domain (Arrestin_N)Arrestin (or S-antigen), N-terminal domainIg-like beta-sandwich fold. Scop reports duplication with C-terminal domain. Domain
A [auth B]PF02752Arrestin (or S-antigen), C-terminal domain (Arrestin_C)Arrestin (or S-antigen), C-terminal domainIg-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Domain
D [auth L]PF01279Parathyroid hormone family (Parathyroid)Parathyroid hormone family- Family
E [auth R]PF000027 transmembrane receptor (Secretin family) (7tm_2)7 transmembrane receptor (Secretin family)This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognise ...This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 (Swiss:P48960); calcium-independent receptors for latrotoxin (such as Swiss:O94910), and brain-specific angiogenesis inhibitors (such as Swiss:O14514) amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins (e.g. Swiss:P83119). Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]Beta-arrestin-1
B [auth C]Fab30H---
C [auth E]Fab30L---
D [auth L]LA-PTH
E [auth R]Parathyroid hormone/parathyroid hormone-related peptide receptor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth B]PharosP49407
E [auth R]PharosQ03431

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
E [auth R]SEP Parent Component: SER

RESIDAA0037

PSI-MOD :  O-phospho-L-serine MOD:00046
E [auth R]TPO Parent Component: THR

RESIDAA0037 , AA0038

PSI-MOD :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047