9I78 | pdb_00009i78

Cryo-EM structure of Chaetomium thermophilum ribosome-bound SND3 translocon

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H [auth LB]	SCOP2B Superfamily	Translational proteins	8106162	3000811	SCOP2B (2022-06-29)
J [auth LD]	SCOP2B Superfamily	Translational machinery components	8106194	3000571	SCOP2B (2022-06-29)
P [auth LJ]	SCOP2B Superfamily	RL5-like	8077505	3001709	SCOP2B (2022-06-29)
W [auth LR]	SCOP2B Superfamily	Ribosomal protein L19 (L19e)	8106186	3000890	SCOP2B (2022-06-29)
I [auth LC]	SCOP2B Superfamily	Ribosomal protein L4	8077111	3001146	SCOP2B (2022-06-29)
TA [auth Lp]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8106178	3001320	SCOP2B (2022-06-29)
PA [auth Ll]	SCOP2B Superfamily	Ribosomal protein L39e	8106282	3001756	SCOP2B (2022-06-29)
KA [auth Lg]	SCOP2B Superfamily	Ribosomal protein L34e-like	8106200	3002203	SCOP2B (2022-06-29)
JA [auth Lf]	SCOP2B Superfamily	Translational proteins	8106190	3000811	SCOP2B (2022-06-29)
IA [auth Le]	SCOP2B Superfamily	Ribosomal protein L32e	8106182	3000982	SCOP2B (2022-06-29)
GA [auth Lc]	SCOP2B Superfamily	L30e-like	8106196	3001739	SCOP2B (2022-06-29)
CA [auth LY]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8106166	3000334	SCOP2B (2022-06-29)
AA [auth LV]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8106208	3000433	SCOP2B (2022-06-29)
Z [auth LU]	SCOP2B Superfamily	60S Ribosomal protein L22e	8106192	3002158	SCOP2B (2022-06-29)
S [auth LN]	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8106168	3000210	SCOP2B (2022-06-29)
O [auth LI]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8106198	3000884	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 1]	PF10559	Plug domain of Sec61p (Plug_translocon)	Plug domain of Sec61p	The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unl ...	The Sec61/SecY translocon mediates translocation of proteins across the membrane and integration of membrane proteins into the lipid bilayer. The structure of the translocon revealed a plug domain blocking the pore on the lumenal side.The plug is unlikely to be important for sealing the translocation pore in yeast but it plays a role in stabilising Sec61p during translocon formation. The domain runs from residues 52-74 [1].	Domain
A [auth 1]	PF00344	SecY (SecY)	SecY	-	Family
H [auth LB]	PF01779	Ribosomal L29e protein family (Ribosomal_L29e)	Ribosomal L29e protein family	-	Family
J [auth LD]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
J [auth LD]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
J [auth LD]	PF14204	Ribosomal L18 C-terminal region (Ribosomal_L18_c)	Ribosomal L18 C-terminal region	This domain is the C-terminal end of ribosomal L18/L5 proteins.	Domain
K [auth LE]	PF01655	Ribosomal protein L32 (Ribosomal_L32e)	Ribosomal protein L32	-	Family
K [auth LE]	PF01159	Ribosomal protein L6e (Ribosomal_L6e)	Ribosomal protein L6e	-	Family
N [auth LH]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
N [auth LH]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
P [auth LJ]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
P [auth LJ]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
Q [auth LL]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
Q [auth LL]	PF01294	Ribosomal protein L13e (Ribosomal_L13e)	Ribosomal protein L13e	-	Family
W [auth LR]	PF01280	Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)	Ribosomal protein L19e, N-terminal domain	This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.	Domain
W [auth LR]	PF25476	Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)	Ribosomal protein L19e, C-terminal domain	This domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.	Domain
BA [auth LX]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
I [auth LC]	PF14374	60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)	60S ribosomal protein L4 C-terminal domain	This family is found at the very C-terminal of 60 ribosomal L4 proteins.	Domain
I [auth LC]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
I [auth LC]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
G [auth LA]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
DA [auth LZ]	PF01777	Ribosomal L27e protein family (Ribosomal_L27e)	Ribosomal L27e protein family	-	Family
C [auth 3]	PF00584	SecE/Sec61-gamma subunits of protein translocation complex (SecE)	SecE/Sec61-gamma subunits of protein translocation complex	-	Family
CA [auth LY]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
CA [auth LY]	PF00467	KOW motif (KOW)	KOW motif	-	Family
AA [auth LV]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
Z [auth LU]	PF01776	Ribosomal L22e protein family (Ribosomal_L22e)	Ribosomal L22e protein family	-	Family
X [auth LS]	PF01775	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A	This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.	Domain
V [auth LQ]	PF01778	Ribosomal L28e protein family (Ribosomal_L28e)	Ribosomal L28e protein family	-	Family
V [auth LQ]	PF17135	Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)	Ribosomal protein 60S L18 and 50S L18e	-	Family
U [auth LP]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
U [auth LP]	PF01780	Ribosomal L37ae protein family (Ribosomal_L37ae)	Ribosomal L37ae protein family	-	Family
T [auth LO]	PF00935	Ribosomal protein L44 (Ribosomal_L44)	Ribosomal protein L44	-	Family
T [auth LO]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
S [auth LN]	PF05162	Ribosomal protein L41 (Ribosomal_L41)	Ribosomal protein L41	-	Family
S [auth LN]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
R [auth LM]	PF01929	Ribosomal protein L14 (Ribosomal_L14e)	Ribosomal protein L14	-	Family
O [auth LI]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
O [auth LI]	PF01158	Ribosomal protein L36e (Ribosomal_L36e)	Ribosomal protein L36e	-	Family
M [auth LG]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
L [auth LF]	PF08079	Ribosomal L30 N-terminal domain (Ribosomal_L30_N)	Ribosomal L30 N-terminal domain	This presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].	Domain
L [auth LF]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
L [auth LF]	PF01247	Ribosomal protein L35Ae (Ribosomal_L35Ae)	Ribosomal protein L35Ae	This entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1]	Translocon Sec61/SecY plug domain-containing protein	-	localization establishment of protein localization protein transport transport macromolecule localization intracellular protein localization establishment of localization	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
E [auth 6]	Putative inorganic phosphate transporter protein	-	localization establishment of protein localization establishment of protein localization to organelle protein targeting establishment of localization establishment of protein localization to endoplasmic reticulum protein targeting to ER	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle endoplasmic reticulum endomembrane system
F [auth 7]	Translocon-associated protein subunit alpha	-	-	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
H [auth LB]	60S ribosomal protein L3-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth LD]	60S ribosomal protein l5-like protein	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K [auth LE]	60S ribosomal protein L6	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth LH]	60S ribosomal protein l9-like protein	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth LJ]	Putative ribosomal protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Q [auth LL]	60S ribosomal protein L13	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W [auth LR]	Ribosomal protein L19	enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity structural molecule activity structural constituent of ribosome	cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation regulation of cellular process protein biosynthetic process regulation of primary metabolic process cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation regulation of cellular process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression translational initiation protein metabolic process regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process translation gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of cytoplasmic translational initiation cytoplasmic translation cytoplasmic translational initiation metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of cytoplasmic translation regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth LX]	60S ribosomal protein L25-like protein	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
EA [auth La]	60S ribosomal protein L28-like protein	-	-	-
FA [auth Lb]	60S ribosomal protein L29	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
LA [auth Lh]	Dolichyl-diphosphooligosaccharide--protein glycotransferase	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding oligosaccharyl transferase activity glycosyltransferase activity dolichyl-diphosphooligosaccharide-protein glycotransferase activity transferase activity hexosyltransferase activity catalytic activity	macromolecule modification metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process biosynthetic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex organelle subcompartment oligosaccharyltransferase complex membrane membrane protein complex intracellular membrane-bounded organelle transferase complex endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex organelle subcompartment oligosaccharyltransferase complex membrane membrane protein complex intracellular membrane-bounded organelle transferase complex endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane preribosome ribonucleoprotein complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome membraneless organelle ribosome cytosol large ribosomal subunit
NA [auth Lj]	Ribosomal protein L37	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	preribosome protein-containing complex ribonucleoprotein complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle membraneless organelle ribosome cytoplasm preribosome protein-containing complex ribonucleoprotein complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
OA [auth Lk]	60S ribosomal protein L38-like protein	-	-	-
QA [auth Lm]	Putative ribosomal protein	-	-	-
SA [auth Lo]	60S ribosomal protein L44-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
WA [auth L2]	5.8S rRNA	-	-	-
I [auth LC]	60S ribosomal protein L4-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
G [auth LA]	60S ribosomal protein L2-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
XA [auth L3]	5S rRNA	-	-	-
VA [auth L1]	26S rRNA	-	-	-
UA [auth Lq]	Putative 60S ribosomal protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
TA [auth Lp]	60S ribosomal protein L43-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
RA [auth Ln]	60S ribosomal protein L41-A	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
PA [auth Ll]	Ribosomal protein eL39	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	preribosome protein-containing complex ribonucleoprotein complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle membraneless organelle ribosome cytoplasm preribosome protein-containing complex ribonucleoprotein complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
D [auth 4]	CCDC47	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process calcium ion homeostasis endoplasmic reticulum calcium ion homeostasis cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum cytoplasm intracellular membrane-bounded organelle endomembrane system
MA [auth Li]	60S ribosomal protein L36	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
KA [auth Lg]	Ribosomal protein l34-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
JA [auth Lf]	60S ribosomal protein l33-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
IA [auth Le]	60S ribosomal protein L32-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
HA [auth Ld]	Putative 60S ribosomal protein	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
GA [auth Lc]	60S ribosomal protein l30-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	-	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DA [auth LZ]	60S ribosomal protein L27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
C [auth 3]	SEC61 gamma subunit	macromolecule transmembrane transporter activity protein transporter activity protein transmembrane transporter activity transporter activity transmembrane transporter activity	cellular localization establishment of protein localization transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport protein targeting	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
CA [auth LY]	60S ribosomal protein L26-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
AA [auth LV]	60S ribosomal protein l23-like protein	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Z [auth LU]	60S ribosomal protein L22-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
Y [auth LT]	60S ribosomal protein l21-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
X [auth LS]	60S ribosomal protein L20	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
V [auth LQ]	Ribosomal protein L18-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U [auth LP]	60S ribosomal protein l17-like protein	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
T [auth LO]	60S ribosomal protein L16-like protein	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth 2]	SEC61 beta subunit	-	-	-
S [auth LN]	Ribosomal protein L15	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth LM]	60S ribosomal protein L14-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal large subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal large subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth LI]	60S ribosomal protein L10-like protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
M [auth LG]	60S ribosomal protein L8	RNA binding binding nucleic acid binding	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth LF]	60S ribosomal protein l7-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribosomal large subunit biogenesis macromolecule biosynthetic process nucleic acid metabolic process maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) biosynthetic process cellular process metabolic process macromolecule metabolic process maturation of LSU-rRNA	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1]	IPR002208	SecY/SEC61-alpha family	Family
A [auth 1]	IPR030659	SecY conserved site	Conserved Site
A [auth 1]	IPR019561	Translocon Sec61/SecY, plug domain	Domain
A [auth 1]	IPR023201	SecY domain superfamily	Homologous Superfamily
E [auth 6]	IPR012098	SRP-independent targeting protein 3	Family
F [auth 7]	IPR005595	Translocon-associated protein (TRAP), alpha subunit	Family
H [auth LB]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
H [auth LB]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
H [auth LB]	IPR044892	Ribosomal protein L3, domain 3, archaeal-type superfamily	Homologous Superfamily
H [auth LB]	IPR000597	Large ribosomal subunit protein uL3	Family
H [auth LB]	IPR045077	Large ribosomal subunit protein uL3, archaea/eukaryota	Family
J [auth LD]	IPR057268	Large ribosomal subunit protein uL18	Family
J [auth LD]	IPR005485	Large ribosomal subunit protein uL18, eukaryota/archaea	Family
J [auth LD]	IPR025607	Large ribosomal subunit protein uL18, C-terminal, eukaryotes	Domain
K [auth LE]	IPR049633	Large ribosomal subunit protein eL6, conserved site	Conserved Site
K [auth LE]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
K [auth LE]	IPR041997	Large ribosomal subunit protein eL6, KOW domain	Domain
K [auth LE]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
K [auth LE]	IPR000915	Large ribosomal subunit protein eL6	Family
N [auth LH]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
N [auth LH]	IPR002359	Large ribosomal subunit protein uL6, conserved site-2	Conserved Site
N [auth LH]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
N [auth LH]	IPR000702	Large ribosomal subunit protein uL6-like	Family
P [auth LJ]	IPR057266	Large ribosomal subunit protein uL5, eukaryota/archaea	Family
P [auth LJ]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
P [auth LJ]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
P [auth LJ]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
P [auth LJ]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
P [auth LJ]	IPR002132	Large ribosomal subunit protein uL5	Family
Q [auth LL]	IPR001380	Large ribosomal subunit protein eL13	Family
Q [auth LL]	IPR018256	Large ribosomal subunit protein eL13, conserved site	Conserved Site
W [auth LR]	IPR056809	GCN1-like, HEAT repeats	Domain
W [auth LR]	IPR016024	Armadillo-type fold	Homologous Superfamily
W [auth LR]	IPR023638	Large ribosomal subunit protein eL19, conserved site	Conserved Site
W [auth LR]	IPR057546	Stalled ribosome sensor GCN1-like, HEAT repeats region	Domain
W [auth LR]	IPR057260	Ribosomal protein L19e, C-terminal domain	Domain
W [auth LR]	IPR004155	PBS lyase HEAT-like repeat	Repeat
W [auth LR]	IPR034085	TOG domain	Domain
W [auth LR]	IPR019399	Parkin co-regulated protein	Family
W [auth LR]	IPR033935	Large ribosomal subunit protein eL19, eukaryotic	Domain
W [auth LR]	IPR021133	HEAT, type 2	Repeat
W [auth LR]	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
W [auth LR]	IPR057259	Ribosomal protein L19e, N-terminal domain	Domain
W [auth LR]	IPR011989	Armadillo-like helical	Homologous Superfamily
W [auth LR]	IPR022716	Gcn1, N-terminal	Domain
W [auth LR]	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
W [auth LR]	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
W [auth LR]	IPR056810	Stalled ribosome sensor GCN1-like, N-terminal	Domain
BA [auth LX]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
BA [auth LX]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
BA [auth LX]	IPR005633	Large ribosomal subunit protein uL23, N-terminal	Domain
BA [auth LX]	IPR013025	Large ribosomal subunit protein uL23-like	Family
FA [auth Lb]	IPR002673	Large ribosomal subunit protein eL29	Family
LA [auth Lh]	IPR003674	Oligosaccharyl transferase, STT3 subunit	Family
LA [auth Lh]	IPR048307	Oligosaccharyl transferase STT3, N-terminal domain	Domain
LA [auth Lh]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
LA [auth Lh]	IPR001854	Large ribosomal subunit protein uL29	Family
LA [auth Lh]	IPR048999	STT3/PglB/AglB, core domain	Domain
NA [auth Lj]	IPR001569	Large ribosomal subunit protein eL37	Family
NA [auth Lj]	IPR018267	Large ribosomal subunit protein eL37, conserved site	Conserved Site
NA [auth Lj]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
NA [auth Lj]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
SA [auth Lo]	IPR053708	Eukaryotic Ribosomal Large Subunit eL42	Homologous Superfamily
SA [auth Lo]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
SA [auth Lo]	IPR000552	Large ribosomal subunit protein eL42	Family
I [auth LC]	IPR025755	Large ribosomal subunit protein uL4, C-terminal domain	Domain
I [auth LC]	IPR002136	Large ribosomal subunit protein uL4	Family
I [auth LC]	IPR013000	Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site	Conserved Site
I [auth LC]	IPR045240	Large ribosomal subunit protein uL4, eukaryota/archaea	Family
I [auth LC]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
G [auth LA]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
G [auth LA]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
G [auth LA]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
G [auth LA]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
G [auth LA]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
G [auth LA]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
G [auth LA]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
G [auth LA]	IPR002171	Large ribosomal subunit protein uL2	Family
UA [auth Lq]	IPR029004	Ribosomal eL28/Mak16	Domain
UA [auth Lq]	IPR002672	Large ribosomal subunit protein eL28	Family
TA [auth Lp]	IPR002674	Large ribosomal subunit protein eL43	Family
TA [auth Lp]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
TA [auth Lp]	IPR011331	Large ribosomal subunit protein eL37/eL43	Homologous Superfamily
TA [auth Lp]	IPR050522	Eukaryotic ribosomal protein eL43	Family
RA [auth Ln]	IPR007836	Large ribosomal subunit protein eS32	Family
PA [auth Ll]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
PA [auth Ll]	IPR000077	Large ribosomal subunit protein eL39	Family
D [auth 4]	IPR012879	PAT complex subunit CCDC47	Family
MA [auth Li]	IPR000509	Large ribosomal subunit protein eL36	Family
MA [auth Li]	IPR038097	Large ribosomal subunit protein eL36 domain superfamily	Homologous Superfamily
KA [auth Lg]	IPR008195	Large ribosomal subunit protein eL34	Family
KA [auth Lg]	IPR038562	Large ribosomal subunit protein eL34, C-terminal domain superfamily	Homologous Superfamily
KA [auth Lg]	IPR018065	Large ribosomal subunit protein eL34, conserved site	Conserved Site
JA [auth Lf]	IPR038661	Large ribosomal subunit protein eL33 superfamily	Homologous Superfamily
JA [auth Lf]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
JA [auth Lf]	IPR001780	Large ribosomal subunit protein eL33	Family
JA [auth Lf]	IPR018266	Large ribosomal subunit protein eL33, conserved site	Conserved Site
IA [auth Le]	IPR036351	Large ribosomal subunit protein eL32 superfamily	Homologous Superfamily
IA [auth Le]	IPR001515	Large ribosomal subunit protein eL32	Family
HA [auth Ld]	IPR020052	Large ribosomal subunit protein eL31, conserved site	Conserved Site
HA [auth Ld]	IPR023621	Large ribosomal subunit protein eL31 domain superfamily	Homologous Superfamily
HA [auth Ld]	IPR000054	Large ribosomal subunit protein eL31	Family
GA [auth Lc]	IPR022991	Large ribosomal subunit protein eL30, conserved site	Conserved Site
GA [auth Lc]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
GA [auth Lc]	IPR000231	Large ribosomal subunit protein eL30	Family
GA [auth Lc]	IPR039109	Large ribosomal subunit protein eL30-like	Family
GA [auth Lc]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
DA [auth LZ]	IPR018262	Large ribosomal subunit protein eL27, conserved site	Conserved Site
DA [auth LZ]	IPR038655	Large ribosomal subunit protein eL27 superfamily	Homologous Superfamily
DA [auth LZ]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
DA [auth LZ]	IPR001141	Large ribosomal subunit protein eL27	Family
DA [auth LZ]	IPR041991	Large ribosomal subunit protein eL27, KOW domain	Domain
C [auth 3]	IPR008158	Protein translocase SEC61 complex, gamma subunit	Family
C [auth 3]	IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	Family
C [auth 3]	IPR023391	Protein translocase SecE domain superfamily	Homologous Superfamily
CA [auth LY]	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
CA [auth LY]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
CA [auth LY]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
CA [auth LY]	IPR005824	KOW	Domain
CA [auth LY]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
AA [auth LV]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
AA [auth LV]	IPR000218	Large ribosomal subunit protein uL14	Family
AA [auth LV]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
Z [auth LU]	IPR002671	Large ribosomal subunit protein eL22	Family
Z [auth LU]	IPR038526	Large ribosomal subunit protein eL22 superfamily	Homologous Superfamily
Y [auth LT]	IPR018259	Large ribosomal subunit protein eL21, conserved site	Conserved Site
Y [auth LT]	IPR036948	Large ribosomal subunit protein eL21 superfamily	Homologous Superfamily
Y [auth LT]	IPR001147	Large ribosomal subunit protein eL21	Family
Y [auth LT]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
X [auth LS]	IPR028877	Large ribosomal subunit protein eL20	Family
X [auth LS]	IPR023573	Large ribosomal subunit protein eL20 domain	Domain
X [auth LS]	IPR021138	Large ribosomal subunit protein eL20, eukaryota	Family
V [auth LQ]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
V [auth LQ]	IPR021132	Large ribosomal subunit protein eL18, conserved site	Conserved Site
V [auth LQ]	IPR000039	Large ribosomal subunit protein eL18	Family
V [auth LQ]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
U [auth LP]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
U [auth LP]	IPR005721	Large ribosomal subunit protein uL22, eukaryota/archaea	Family
U [auth LP]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
U [auth LP]	IPR001063	Large ribosomal subunit protein uL22	Family
T [auth LO]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
T [auth LO]	IPR005822	Large ribosomal subunit protein uL13	Family
T [auth LO]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
T [auth LO]	IPR005755	Large ribosomal subunit protein uL13, eukaryota/archaea	Family
S [auth LN]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
S [auth LN]	IPR020925	Large ribosomal subunit protein eL15, conserved site	Conserved Site
S [auth LN]	IPR024794	Large ribosomal subunit protein eL15 core domain superfamily	Homologous Superfamily
S [auth LN]	IPR000439	Large ribosomal subunit protein eL15	Family
R [auth LM]	IPR039660	Large ribosomal subunit protein eL14	Family
R [auth LM]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
R [auth LM]	IPR002784	Large ribosomal subunit protein eL14 domain	Domain
R [auth LM]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
O [auth LI]	IPR001197	Large ribosomal subunit protein uL16, eukaryota/archaea	Family
O [auth LI]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
O [auth LI]	IPR018255	Large ribosomal subunit protein uL16, conserved site, eukaryota/archaea	Conserved Site
O [auth LI]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
O [auth LI]	IPR047873	Large ribosomal subunit protein uL16	Family
M [auth LG]	IPR050257	Large ribosomal subunit protein eL8/uL1-like	Family
M [auth LG]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
M [auth LG]	IPR004037	Large ribosomal subunit protein eL8-like, conserved site	Conserved Site
M [auth LG]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
M [auth LG]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
M [auth LG]	IPR001921	Large ribosomal subunit protein eL8, eukaryota	Family
L [auth LF]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
L [auth LF]	IPR005998	Large ribosomal subunit protein uL30, eukaryota	Family
L [auth LF]	IPR039699	Large ribosomal subunit protein uL30	Family
L [auth LF]	IPR035808	Large ribosomal subunit protein uL30, eukaryota/archaea	Domain
L [auth LF]	IPR012988	Large ribosomal subunit protein uL30, N-terminal, eukaryota	Domain
L [auth LF]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
VA [auth L1]	OMG	Parent Component: G
T [auth LO]	ACE	RESID: AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 PSI-MOD : N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359