9BPU | pdb_00009bpu

Structure of the IFN-lambda4/IFN-lambdaR1/IL-10Rbeta receptor complex with an engineered IL-10Rbeta

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	MMR_HSR1	e9bpuB01	A: a/b three-layered sandwiches	X: ATP-grasp_6	H: ATP-grasp_6	T: ATP-grasp_6	F: MMR_HSR1	ECOD (v294.1)
B [auth A]	MMR_HSR1	e9bpuA01	A: a/b three-layered sandwiches	X: ATP-grasp_6	H: ATP-grasp_6	T: ATP-grasp_6	F: MMR_HSR1	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A]	PF01108	Tissue factor (Tissue_fac)	Tissue factor	-	Family
B [auth A]	PF09294	Interferon-alpha/beta receptor, fibronectin type III (Interfer-bind)	Interferon-alpha/beta receptor, fibronectin type III	Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha [1].	Domain
A [auth C]	PF15177	Interleukin-28A (IL28A)	Interleukin-28A	The protein family, Interleukin-28A, plays an important role in modulating the immune system. This protein family is induced by viral infection and interacts with a class II receptor [1]. This family of proteins is found in eukaryotes. Proteins in th ...	The protein family, Interleukin-28A, plays an important role in modulating the immune system. This protein family is induced by viral infection and interacts with a class II receptor [1]. This family of proteins is found in eukaryotes. Proteins in this family are typically between 145 and 195 amino acids in length.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth B]	Interferon lambda receptor 1	molecular transducer activity transmembrane signaling receptor activity signaling receptor activity cytokine receptor activity immune receptor activity	regulation of defense response regulation of response to biotic stimulus regulation of biological process biological process involved in interspecies interaction between organisms response to stimulus regulation of response to external stimulus defense response response to other organism biological regulation response to external stimulus response to biotic stimulus regulation of defense response to virus defense response to virus regulation of response to stimulus response to stress regulation of defense response regulation of response to biotic stimulus regulation of biological process biological process involved in interspecies interaction between organisms response to stimulus regulation of response to external stimulus defense response response to other organism biological regulation response to external stimulus response to biotic stimulus regulation of defense response to virus defense response to virus regulation of response to stimulus response to stress regulation of response to stress regulation of defense response to virus by host response to external biotic stimulus response to virus cellular response to stimulus regulation of cellular process cell surface receptor signaling pathway signaling response to cytokine cytokine-mediated signaling pathway cell communication response to peptide response to chemical cellular process cellular response to cytokine stimulus signal transduction negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation negative regulation of cellular process negative regulation of biological process immune response immune system process mucosal immune response organ or tissue specific immune response response to type III interferon interferon-mediated signaling pathway innate immune response type III interferon-mediated signaling pathway defense response to symbiont defense response to other organism cellular response to type III interferon cellular respiration energy derivation by oxidation of organic compounds positive regulation of biological process regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of cellular respiration positive regulation of cellular respiration positive regulation of metabolic process metabolic process regulation of metabolic process positive regulation of cellular process cellular response to virus	cell periphery protein-containing complex cellular anatomical structure plasma membrane protein complex membrane plasma membrane plasma membrane signaling receptor complex membrane protein complex interleukin-28 receptor complex receptor complex
B [auth A]	Interleukin-10 receptor subunit beta	molecular transducer activity signaling receptor activity coreceptor activity transmembrane signaling receptor activity cytokine receptor activity immune receptor activity interleukin-10 receptor activity	cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation response to cytokine cytokine-mediated signaling pathway cell communication response to peptide response to chemical cellular process cellular response to cytokine stimulus cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation response to cytokine cytokine-mediated signaling pathway cell communication response to peptide response to chemical cellular process cellular response to cytokine stimulus signal transduction interleukin-10-mediated signaling pathway immune response immune system process positive regulation of cell communication cell surface receptor signaling pathway via STAT positive regulation of signal transduction positive regulation of biological process positive regulation of receptor signaling pathway via STAT regulation of signal transduction positive regulation of receptor signaling pathway via JAK-STAT positive regulation of response to stimulus regulation of receptor signaling pathway via JAK-STAT positive regulation of cellular process regulation of signaling regulation of response to stimulus regulation of cell communication regulation of receptor signaling pathway via STAT cell surface receptor signaling pathway via JAK-STAT positive regulation of signaling biological process involved in interspecies interaction between organisms response to type III interferon response to biotic stimulus interferon-mediated signaling pathway response to stress innate immune response response to external biotic stimulus response to other organism defense response type III interferon-mediated signaling pathway defense response to symbiont response to external stimulus defense response to other organism cellular response to type III interferon inflammatory response defense response to virus response to virus cellular respiration energy derivation by oxidation of organic compounds regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of cellular respiration positive regulation of cellular respiration positive regulation of metabolic process metabolic process regulation of metabolic process cellular response to virus	cell periphery protein-containing complex cellular anatomical structure plasma membrane protein complex membrane plasma membrane plasma membrane signaling receptor complex membrane protein complex interleukin-28 receptor complex receptor complex
A [auth C]	Interferon lambda-4	protein binding binding signaling receptor binding molecular function activator activity molecular function regulator activity cytokine activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity	regulation of biological process response to stimulus immune response biological regulation positive regulation of biological process positive regulation of response to stimulus positive regulation of immune response regulation of response to stimulus immune system process regulation of immune response regulation of immune system process positive regulation of immune system process cellular response to stimulus regulation of cellular process regulation of biological process response to stimulus immune response biological regulation positive regulation of biological process positive regulation of response to stimulus positive regulation of immune response regulation of response to stimulus immune system process regulation of immune response regulation of immune system process positive regulation of immune system process cellular response to stimulus regulation of cellular process biological process involved in interspecies interaction between organisms signaling response to cytokine response to type III interferon cytokine-mediated signaling pathway response to biotic stimulus cell communication interferon-mediated signaling pathway response to stress innate immune response cellular response to cytokine stimulus signal transduction response to external biotic stimulus cell surface receptor signaling pathway response to other organism defense response type III interferon-mediated signaling pathway defense response to symbiont response to external stimulus response to peptide response to chemical defense response to other organism cellular process cellular response to type III interferon cell surface receptor signaling pathway via STAT peptidyl-tyrosine modification peptidyl-amino acid modification phosphate-containing compound metabolic process protein metabolic process protein modification process phosphorus metabolic process tyrosine phosphorylation of STAT protein protein phosphorylation phosphorylation primary metabolic process macromolecule modification metabolic process macromolecule metabolic process peptidyl-tyrosine phosphorylation cell surface receptor signaling pathway via JAK-STAT defense response to virus response to virus cellular response to virus	cellular anatomical structure intracellular anatomical structure cytoplasm extracellular region extracellular space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth B]	IPR050650	Type-II_Cytokine-TF_Rcpt	Unknown
C [auth B]	IPR003961	Fibronectin type III	Domain
C [auth B]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
C [auth B]	IPR036116	Fibronectin type III superfamily	Homologous Superfamily
B [auth A]	IPR050650	Type-II_Cytokine-TF_Rcpt	Unknown
B [auth A]	IPR003961	Fibronectin type III	Domain
B [auth A]	IPR015373	Interferon/interleukin receptor domain	Domain
B [auth A]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth A]	IPR036116	Fibronectin type III superfamily	Homologous Superfamily
A [auth C]	IPR029177	Interferon lambda	Family
A [auth C]	IPR038326	Interferon lambda superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth B]	Pharos: Q8IU57	psoriasis breast cancer malignant glioma facioscapulohumeral muscular dystrophy osteosarcoma Pustulosis of Palms and Soles malignant ependymoma pilocytic astrocytoma pustulosis palmaris et plantaris
B [auth A]	Pharos: Q08334	inflammatory bowel disease 25 brain ischemia hepatitis B virus infection diabetes mellitus lung cancer medulloblastoma rheumatoid arthritis Cerebral Ischemia Down syndrome inflammatory bowel disease malignant ependymoma ovarian cancer subependymal giant cell astrocytoma Crohn disease glioblastoma inflammatory bowel disease 25 brain ischemia hepatitis B virus infection diabetes mellitus lung cancer medulloblastoma rheumatoid arthritis Cerebral Ischemia Down syndrome inflammatory bowel disease malignant ependymoma ovarian cancer subependymal giant cell astrocytoma Crohn disease glioblastoma malignant glioma pilocytic astrocytoma ulcerative colitis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.